Gene detail information of Glyur000763s00023740 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39200.1 | 1.00E-126 | Seven transmembrane MLO family protein |
| NR | ADV40949.1 | 0 | MLO1 [Medicago truncatula] |
| Swissprot | tr|O80961|MLO12_ARATH | 5.00E-165 | MLO-like protein 12 |
| trEMBL | tr|G8D2D1|G8D2D1_MEDTR | 0 | MLO-like protein {ECO:0000256|RuleBase:RU280816} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00763 | 10633 | 18999 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000763s00023740.1 | PF03094.10 | Mlo | 8 | 220 | 2.90E-86 |
| Glyur000763s00023740.1 | PF03094.10 | Mlo | 220 | 255 | 2.40E-08 |
| Glyur000763s00023740.1 | PF03094.10 | Mlo | 260 | 337 | 4.00E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.480 |
| SRR1783600 | control | 2.616 |
| SRR1783602 | moderate drought stress | 1.890 |
| SRR1811619 | moderate drought stress | 1.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.003 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.005 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.196 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.573 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.284 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.591 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.132 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.132 |
| SRR2868004 | Drought Stress (root) | 42.459 |
| SRR2967015 | Control (root) | 40.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 82.812 |
| SRR9715740 | Leaf | 53.468 |
| SRR9715741 | Leaf | 112.607 |
| SRR9715739 | Root | 0.281 |
| SRR9715742 | Root | 1.238 |
| SRR9715743 | Root | 1.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.353 |
| SRR8749028 | MeJA induced 9h | 12.621 |
| SRR8749029 | MeJA induced 9h | 3.918 |
| SRR8749030 | Uninduced | 53.794 |
| SRR8749031 | Uninduced | 32.501 |
| SRR8749032 | Uninduced | 11.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.967 |
| SRR8400027 | Control - Root | 10.419 |