Gene detail

Gene detail information of Glyur000762s00020839.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G48360.1	1.00E-83	BTB and TAZ domain protein 2
NR	XP_004501838.1	1.05E-179	PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q94BN0\|BT2_ARATH	1.00E-120	BTB/POZ and TAZ domain-containing protein 2
trEMBL	tr\|K7KL24\|K7KL24_SOYBN	6.00E-178	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G36500.2}

Sequence

Transcript Sequence

>Glyur000762s00020839.1
TTTTCTCCTCCTCCTTCTTTCCAGAGTTGGCTCATCATCCTTTCCCCTCATACATAGCTCGTTATTATTGTCCTTAAAATTCATATTATCAACTCCCAAACCCAATTCTCCTTCCATCACTCTTTAACTCAACCAATTAATTTATGGATGCCCCAGTTGCTCCCACCACCCACTTTCACGCCACTCGGGTCTTACCCGAACCCGACATTTATCTTCACACTCCCGGGGGAACGCGCATTCCAGCGCACGCAAGCATTTTGGCTTCGGCNTCCCCAGTTCTAGAGAACATAGTAATGTCCAACAGAATCGTTAAAATCCACGGCGTTCCATACGACGCCGTCACCGCCTTCTTAGCGTTCCTCTACTCCTCCAGGTGCAGCGAGGAGGATATGGACAAGTACGGAGTGCACCTTCTGGTACTATCGCACGTGTATTCGGTGACTCTGCTGAAGCAGAGGTGCATCAAGGGGCTGTCCCAACGCGTGACCACAGAGAACGCGGTGGACGTGTTGCAACTTGCAAGGCTCTGCGATGCGCCGGATCTCTACCTCAAGTGCGCGAAGCTGCTGACGTGTCATTTCAAAGCAGTGAAGGAAACAGAGGCGTGGAAATTCCTTCAGAATCATGACCCCCGCCTCGAGCTCGACATTCTCCATTTCATGGACGAACGCGAATCGAGGAAGAAGAGGGCGAGGAGGAGGAGGGGGGAGCAGAGGCTGTATGTGCAGCTGAGTGAGGCGATGGAATGTTTGGAGCACATATGCACGGAGGGGTGCACCCACGTAGGGCCGTACGATGCGGACCTTAAACAACAGAGGAGGCCCTGTTCCAAATTCTCCACGTGTCAGGNTCTGCAGGGGTTGATACGGCACTTCGCCACGTGTAACAAGAGGCTCAACGGAGGGTGCTACTGCTTGCGGTGTAAGCGTATGTGGCAACTCTTCAGACTCCACTCCTCCATTTGCCTTAACCAAGATTCCTGCAAGGTCCCTCTTTGCAGACAAATTCAANTGAAAATAGAGGAAAAGAACAAGGAAGATGATGAGAGGTGGAAACTACTGGTGAGGAAAGTGGCCTCGGCCAAAGCCATGTCTTCCTTGTCACTACCAAAGAGGAATCGGGATGAGGAAATTANTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00762	114869	117604	+

Gene family

Gene family	subfamily
Transcription Factors Family	TAZ
Ubiquitin Family	BTB
Ubiquitin Family	3-box

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

cellular_component
GO:0005634 nucleus

molecular_function

GO:0003712 transcription cofactor activity

GO:0004402 histone acetyltransferase activity

GO:0005515 protein binding

GO:0008270 zinc ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000762s00020839.1	PF00651.26	BTB	21	112	3.00E-09
Glyur000762s00020839.1	PF02135.11	zf-TAZ	195	285	2.20E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	18.292
SRR1783600	control	18.363
SRR1783602	moderate drought stress	27.365
SRR1811619	moderate drought stress	27.141

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.470
DRR006520	Root Summer glycyrrhizin high producing strain	0.419
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.570
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.569

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.755
SRR2868004	Drought Stress (root)	16.604
SRR2967015	Control (root)	21.099

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.289
SRR9715740	Leaf	0.167
SRR9715741	Leaf	1.140
SRR9715739	Root	7.840
SRR9715742	Root	5.727
SRR9715743	Root	5.174

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	27.709
SRR8749028	MeJA induced 9h	17.212
SRR8749029	MeJA induced 9h	22.898
SRR8749030	Uninduced	17.325
SRR8749031	Uninduced	8.526
SRR8749032	Uninduced	36.169

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.992
SRR8400027	Control - Root	1.508