Gene detail information of Glyur000761s00025806 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60760.1 | 0 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| NR | XP_004487078.1 | 0 | PREDICTED: uncharacterized protein DDB_G0273453/DDB_G0273565-like isoform X1 [Cicer arietinum] |
| COG | NP_295237.1 | 7.00E-20 | 2-phosphoglycerate kinase [Deinococcus radiodurans R1] |
| trEMBL | tr|A0A072VCA1|A0A072VCA1_MEDTR | 0 | 2-phosphoglycerate kinase {ECO:0000313|EMBL:KEH39377.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00761 | 21092 | 26891 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000761s00025806.1 | PF13207.1 | AAA_17 | 141 | 178 | 3.70E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.828 |
| SRR1783600 | control | 21.678 |
| SRR1783602 | moderate drought stress | 17.172 |
| SRR1811619 | moderate drought stress | 17.210 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.737 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.606 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 62.225 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 60.235 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.526 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.645 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.148 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.645 |
| SRR2868004 | Drought Stress (root) | 29.578 |
| SRR2967015 | Control (root) | 28.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.786 |
| SRR9715740 | Leaf | 4.041 |
| SRR9715741 | Leaf | 5.554 |
| SRR9715739 | Root | 5.406 |
| SRR9715742 | Root | 27.012 |
| SRR9715743 | Root | 22.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.257 |
| SRR8749028 | MeJA induced 9h | 39.208 |
| SRR8749029 | MeJA induced 9h | 29.593 |
| SRR8749030 | Uninduced | 22.991 |
| SRR8749031 | Uninduced | 13.443 |
| SRR8749032 | Uninduced | 19.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.763 |
| SRR8400027 | Control - Root | 33.591 |