Gene detail information of Glyur000760s00042751 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15240.2 | 5.00E-32 | Transmembrane amino acid transporter family protein |
| NR | KDO82929.1 | 6.90E-85 | hypothetical protein CISIN_1g048146mg [Citrus sinensis] |
| trEMBL | tr|A0A067GTG3|A0A067GTG3_CITSI | 3.00E-85 | Uncharacterized protein {ECO:0000313|EMBL:KDO82929.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00760 | 112701 | 119409 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000760s00042751.1 | PF01490.13 | Aa_trans | 31 | 155 | 1.00E-14 |
| Glyur000760s00042751.1 | PF01490.13 | Aa_trans | 165 | 259 | 2.50E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.873 |
| SRR1783600 | control | 0.858 |
| SRR1783602 | moderate drought stress | 0.510 |
| SRR1811619 | moderate drought stress | 0.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.764 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.810 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.367 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.312 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.629 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.393 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.377 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.940 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.466 |
| SRR2868004 | Drought Stress (root) | 1.892 |
| SRR2967015 | Control (root) | 2.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.069 |
| SRR9715740 | Leaf | 0.118 |
| SRR9715741 | Leaf | 0.085 |
| SRR9715739 | Root | 0.289 |
| SRR9715742 | Root | 2.130 |
| SRR9715743 | Root | 1.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.742 |
| SRR8400027 | Control - Root | 1.943 |