Gene detail information of Glyur000760s00042750 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G28960.1 | 2.00E-47 | Transmembrane amino acid transporter family protein |
| NR | KEH19717.1 | 3.36E-107 | transmembrane amino acid transporter family protein [Medicago truncatula] |
| trEMBL | tr|A0A072TQN1|A0A072TQN1_MEDTR | 1.00E-107 | Transmembrane amino acid transporter family protein {ECO:0000313|EMBL:KEH19717.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00760 | 4757 | 6163 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000760s00042750.1 | PF01490.13 | Aa_trans | 30 | 209 | 7.90E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.145 |
| SRR1783600 | control | 0.181 |
| SRR1783602 | moderate drought stress | 0.166 |
| SRR1811619 | moderate drought stress | 0.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.379 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.461 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.330 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.372 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.136 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.309 |
| SRR2868004 | Drought Stress (root) | 4.577 |
| SRR2967015 | Control (root) | 5.909 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.528 |
| SRR9715739 | Root | 0.036 |
| SRR9715742 | Root | 2.614 |
| SRR9715743 | Root | 2.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.838 |
| SRR8400027 | Control - Root | 2.792 |