Gene detail information of Glyur000759s00034224 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G01460.1 | 2.00E-17 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_003544814.1 | 1.97E-73 | PREDICTED: transcription factor bHLH96-like [Glycine max] |
| Swissprot | tr|Q9C7T4|BH096_ARATH | 5.00E-29 | Transcription factor bHLH96 |
| trEMBL | tr|I1MAX1|I1MAX1_SOYBN | 7.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G35560.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00759 | 94591 | 95947 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.959 |
| SRR1783600 | control | 8.257 |
| SRR1783602 | moderate drought stress | 5.168 |
| SRR1811619 | moderate drought stress | 7.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.200 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.637 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.787 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.939 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.590 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.378 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.279 |
| SRR2868004 | Drought Stress (root) | 1.281 |
| SRR2967015 | Control (root) | 1.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.801 |
| SRR9715742 | Root | 1.721 |
| SRR9715743 | Root | 1.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.240 |
| SRR8749029 | MeJA induced 9h | 0.156 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.964 |
| SRR8400027 | Control - Root | 3.774 |