Gene detail information of Glyur000758s00019995 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27190.1 | 9.00E-08 | NB-ARC domain-containing disease resistance protein |
| NR | KEH38438.1 | 9.13E-154 | disease resistance protein (CC-NBS-LRR class) family protein [Medicago truncatula] |
| Swissprot | tr|Q8LKZ8|RPS2_ARATH | 4.00E-10 | Disease resistance protein RPS2 |
| trEMBL | tr|A0A072VAM2|A0A072VAM2_MEDTR | 3.00E-154 | Disease resistance protein (CC-NBS-LRR class) family protein {ECO:0000313|EMBL:KEH38438.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00758 | 114257 | 117865 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.073 |
| SRR1783600 | control | 0.092 |
| SRR1783602 | moderate drought stress | 1.671 |
| SRR1811619 | moderate drought stress | 1.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.446 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.435 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.104 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.816 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.105 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.092 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.875 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.254 |
| SRR2868004 | Drought Stress (root) | 9.444 |
| SRR2967015 | Control (root) | 9.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.596 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 1.299 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.008 |
| SRR8749028 | MeJA induced 9h | 0.033 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.028 |
| SRR8749031 | Uninduced | 0.039 |
| SRR8749032 | Uninduced | 0.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.616 |
| SRR8400027 | Control - Root | 6.838 |