Gene detail

Gene detail information of Glyur000758s00019986.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G53580.1	1.00E-90	glyoxalase II 3
NR	KEH38465.1	2.69E-136	hydroxyacylglutathione hydrolase [Medicago truncatula]
COG	YP_007142767.1	3.00E-55	hydroxyacylglutathione hydrolase [Crinalium epipsammum PCC 9333]
Swissprot	tr\|Q9C8L4\|ETHE1_ARATH	1.00E-113	Persulfide dioxygenase ETHE1 homolog, mitochondrial (Precursor)
trEMBL	tr\|A0A072VK05\|A0A072VK05_MEDTR	1.00E-136	Hydroxyacylglutathione hydrolase {ECO:0000313\|EMBL:KEH38465.1}

Sequence

Transcript Sequence

>Glyur000758s00019986.1
TGTTGAACCAGTTGTGTGTAAACTATGGATTTGGATTTCCTGGTCCGTAGTGGCTAGTAGCCACTTCGCGGATAGCAATGCCAATTGTTTTCCTTGTCACTTCCTTCCAATGGGCAATGGCGACGACCTTNGCTATGGCCTGTTAATTGAAACCATCGACCCCAGTTATCACTTCTTTGTCATATCCACTACCCAACAACAACAATAACGTCAACGACCATTCTCTATTTCTGAAACTATTTATACACTTCACCGCCACCANAAAATGCTGCGATTCCACTTCACCAGACTCTNCCCTCTCTTCGCTTCCAAGGCCTCACCGTCATTTCCTCTTTCCCCAATTTCCATTTCCGTTTCCACCGCAATTCACAACCCCGTTAAGCTCAGATCACAGATGGCTTCTTACTCTTCTTCTTCTCCCTCTNCTTCTTCCAAACTCTTGTTCCGTCAGCTCTTCGAGAAGGAATCATCCACCTACACCTANCTTCTCGCTGATGCCTCACACCCTGATAAACCAGCACTTTTGATTGACCCGGTTGATAGGACAGTGGATAGAGACATATCCCTCATTCAGGAACTGGGGTTGAGGCTTGTGTATGCCATGAACACACACGTACATGCAGATCATGTCACTGGGACTGGCCTCATCAAGAGCAAAGTTCCTGATGTAAAATCTGTTATTTCAAAAGCAAGTGGTGCAACGGCAGATCTTTATGTGGAGCCAGNTGATAAGATCCGTTTTGGTGATCTTTATCTAGAGGTTCGTGCAACTCCTGGTCATACCTTGGGTTGCATTACCTATGTTACAGGAGACACACCTGGTCAACCTCAACCTAGAATGGCATTCACAGGAGATACCCTATTAATACGTGGGTGTGGAAGGACAGACTTTCAGATTTTTACGCTGCCCAAAGACACCTTAATCTATCCAGCTCATGACTACAAAGGATTCACTGTAAGCACTGTTGGAGAGGAGATGCAATGTAATCCACGCCTAACAAAGGATGAGGTAATGTTTGATTACATCAACAATTTATGAGCACAATCCACTAAATGAAAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00758	60654	63261	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K17725	ETHE1	EC:1.13.11.18	Sulfur metabolism	map00920

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000758s00019986.1	PF00753.22	Lactamase_B	82	224	2.50E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	39.666
SRR1783600	control	40.077
SRR1783602	moderate drought stress	39.415
SRR1811619	moderate drought stress	38.907

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	34.704
DRR006520	Root Summer glycyrrhizin high producing strain	33.939
DRR006521	Root Winter glycyrrhizin high producing strain	132.035
DRR006522	Root Winter glycyrrhizin high producing strain	126.661
DRR006523	Root Summer glycyrrhizin low producing strain	39.110
DRR006524	Root Summer glycyrrhizin low producing strain	40.761
DRR006525	Leaf Summer glycyrrhizin high producing strain	40.694
DRR006526	Leaf Summer glycyrrhizin high producing strain	39.840

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	39.355
SRR2868004	Drought Stress (root)	43.004
SRR2967015	Control (root)	41.998

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	44.074
SRR9715740	Leaf	32.857
SRR9715741	Leaf	46.943
SRR9715739	Root	10.462
SRR9715742	Root	26.492
SRR9715743	Root	23.267

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	229.780
SRR8749028	MeJA induced 9h	615.250
SRR8749029	MeJA induced 9h	717.396
SRR8749030	Uninduced	619.581
SRR8749031	Uninduced	439.714
SRR8749032	Uninduced	690.289

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	35.896
SRR8400027	Control - Root	39.602