Gene detail

Gene detail information of Glyur000758s00019981

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G14690.1	1.00E-134	cytochrome P450, family 72, subfamily A, polypeptide 15
NR	BAL45206.1	0	cytochrome P450 monooxygenase [Glycyrrhiza uralensis]
COG	NP_354568.1	2.00E-29	cytochrome P450 [Agrobacterium fabrum str. C58]
Swissprot	tr\|H2DH21\|C7A29_PANGI	8.00E-179	Cytochrome P450 CYP72A219
trEMBL	tr\|H1A987\|H1A987_GLYUR	0	Cytochrome P450 monooxygenase {ECO:0000313\|EMBL:BAL45206.1}

Sequence

Transcript Sequence

>Glyur000758s00019981.1
AAAAAAAGAAGAAAAAGACAAAAGGATAACATAGAGAGTCGTGAACCACACAATAGTTTTTGCCGCTCAAATTCTATAAAAACACTACATGTTCCACTTCTGGTTTCACATGTTGTACACACACACACACACACACACACTCTTGCGCTTAATTCCATTGGTTTTATCCTCTTCCCTGTTTTAATTTCTTTGCACCACCAATTACGAACAGCGAAATGGAAACAGTTTGGGCAACAACAACTGCAGGCATAATTCTCACCGTGGTTCTGATATGGGCATGGAGGGTGCTGAATTGGTTATGGTTGAGGCCCAAGAAGCTTGAGAAGCTGCTAAGNGAACAAGGCTTTCAGGGGAATTCGTATAGGCTTTTGGTTGGGGACGCAAAGGAGCTTTTCCAGATGGACAAGGAAACCAAATCGAAACCCATGAATCTCTCGGATGATATAGTGCCACGTGTGTTTCCCTATATCCAACGAAGTGTTAACATACACGGCAAGAATTCTTTTATCTGGTTTGGACCAAGACCAAGGGTGAACCTCACAGATCCTGAGCAAATAAAAGATATTATGATACCAATTTTCTTCAAAAGTTGCAATGATATGATTAGCGATTGGGAGGGGATGCTGTCCTCAGATGGATCGTGTGAAATGGACGTTTGGCCTTCCCTTCAAANTTTGGCTAGTGACGTTATTTCTCGAACATCATTTGGAAGTAGTTACCAAGAAGGAAGAAGAGTATTTCAACTTCTAAAAGAGCAAGCTGAACTTGTAATGAAAGATGTAGTTAAAGCTTTCATCCCTTTATGGAGGTTTCTACCTACTACTACCCATAAGAAGATGAAGGAAATTGACAGAGATGTAAAAGCTTCGCTTAAGGATATGATTATCAAGAGAGAGAAAGCAATGAAAGCGGGTGAAGCCACCAGGAATGACTTATTAGGCATACTTTTGGAGTCAAATCACAAGGAAATTGAAGAACACGGCGGAAACAATAAGAATGTAGGAATGAGTCTTGAAGATGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAGACAACTTCAGTATTGCTTGTTTGGACAATGGTCACAATGATTTTGTATGAGGTCCTTAGGTTGTATCCACCGGTACTTGGGCTTGCTCGAACTATTCCCAAAGATGTGAAACTTGGTAACCTAACATTACCTGCTGGAGTGGAGGTCTCGTTACCAATTGTTTTGGTTCACCGTGACTATGAACTGTGGGGTGATGATGCTGAGAAGTTCAATCCCGAGAGATTTTCTGAAGGACTTCTAAAAGCAACAAATGGCAAAGTTTCATTTTTTCCATTTGGATGGGGTCCTAGAATTTGCATTGGACAAAACTTCTCCCTGTTGGAAGCAAAGATGGCTTTGTCACTGATTTTACAACGTTTCTCATTTGAACTTTCTCCGGCTTATGCTCATGCTCCAACTACTATAATTACTCTTCAGCCACAGTATGGTGCTCATATTATTCTTCGTAAAGTGGAAACATAAAACATAACAATAAGCTCTTAATGTATGGTTTTTATTACAGTGTTGCTGGAAAGCTTATAATGTAACTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00758	26688	31984	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP72A15

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000758s00019981.1	PF00067.17	p450	108	296	3.10E-19
Glyur000758s00019981.1	PF00067.17	p450	292	409	9.40E-37

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.802
SRR1783600	control	1.884
SRR1783602	moderate drought stress	0.926
SRR1811619	moderate drought stress	0.998

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.939
DRR006520	Root Summer glycyrrhizin high producing strain	2.041
DRR006521	Root Winter glycyrrhizin high producing strain	39.198
DRR006522	Root Winter glycyrrhizin high producing strain	39.396
DRR006523	Root Summer glycyrrhizin low producing strain	0.528
DRR006524	Root Summer glycyrrhizin low producing strain	0.583
DRR006525	Leaf Summer glycyrrhizin high producing strain	85.141
DRR006526	Leaf Summer glycyrrhizin high producing strain	84.169

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.115
SRR2868004	Drought Stress (root)	19.769
SRR2967015	Control (root)	18.311

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	46.037
SRR9715740	Leaf	66.255
SRR9715741	Leaf	52.856
SRR9715739	Root	0.046
SRR9715742	Root	0.900
SRR9715743	Root	1.214

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.159
SRR8749028	MeJA induced 9h	0.187
SRR8749029	MeJA induced 9h	0.132
SRR8749030	Uninduced	0.120
SRR8749031	Uninduced	0.096
SRR8749032	Uninduced	0.144

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.435
SRR8400027	Control - Root	4.920