Gene detail

Gene detail information of Glyur000755s00017993

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G30910.1	3.00E-109	Molybdenum cofactor sulfurase family protein
NR	XP_004487898.1	0	PREDICTED: MOSC domain-containing protein 2, mitochondrial-like [Cicer arietinum]
COG	NP_926027.1	6.00E-55	hypothetical protein gll3081 [Gloeobacter violaceus PCC 7421]
Swissprot	tr\|Q655R6\|MOCOS_ORYSJ	2.00E-31	Molybdenum cofactor sulfurase {ECO:0000255\|HAMAP-Rule:MF_03050}
trEMBL	tr\|G7INC8\|G7INC8_MEDTR	0	Mo-molybdopterin cofactor sulfurase {ECO:0000313\|EMBL:AES65112.1}

Sequence

Transcript Sequence

>Glyur000755s00017993.1
CAAGTTTTTGTTCTGTTCTACCGAGTCTGCTATTTAACCATTTTCAGTATTTCAGTATTCCATTGCATTTTGCAGCGTCTACCTATCTATCACGTTGCTGAAATAGCTGTGAGTGTGTCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGGGTGCTGCAGCATCATCATCAGCATCAGCAACTCCCGCAGCTAAAGTTTCGAGCATCTTCATATACCCAATTAAGTCCTGCCGTGGAATCTCTCTTTCCCATGCTCCCCTTACCCCTGCTGGACTACGATGGGATCGACAATGGATGGTGGTGAATTCCAAAGGGAGGGCATGCACTCAGAGAGTTGAACCAAAGCTTGCTTTGGTTGAGGTTGAATTGCCANCTGAGGCATTTGATGAAGCCTGGGAACCTACCCAGGATTCCTTCATGGTGTTGAAAGCACCTGGGATGCAACCTCTCAAAGTTTGTTTGAGCAAACAATATGATAAAGCAACAGATGATATCTCAGTGTGGGAATGGACTGGGTCTGCCTTTGATGAGGGAGCTGAAGCATCGCAGTGGTTTTCAGATTATTTAGGAAAACCCAGTCAACTGGTCCGCTTCAATTCTGCTTCAGAAGTTAGACAAGTCGACCCTGATTATGTTGATGGACAATATGAGACCTTGTTCAGTGATGGTTATCCATTCTTACTCATATCTCAGGAATCATTGGATGCACTAAATGAGCTTGTAGAGGAACCCATACCAATGAATCGTTTCAGACCCAATATCGTTGTTGAAGGTTGTGAACCATATTCTGAAGATGTATGGGCGGAGATCAAGATAGGCAGGTTTTCATTTCTGGGTGTCAAGCTGTGTTCCCGTTGTAAGGTACCTACAATCAATCAAGAGACCGGGATACTTGGACCTGAACCAACTGAAACTCTTACGAAAACTAGGTCTGGCAAAGTCATAAGACCAAATGACAAAAATAAAAACAAGGTCTACTTTGGTCAGAATATGATCTGGAACAGGAAGGATTCTTCTGCTAGAGGGGCTGGAAAAGTTCTTCAAGTGGGAGATCCTGTTTATGTTATCCGAAAGGGAATTTTTCGACGGCCTTCATACCCTTCCAATGCAGATAGTAACACAATGGTTGCTGGGGCACGTAATCTTCTGGAGTCAACATTGCCAAAGCCAGACATGCCTCAGCTTCCCAAGCTTGAGTTGCCACCTCTACCAAAGCCTTCCTTACCTACAGTTCCTGAATTACCTAAGCCAGAGCTGCCCAAGGTCCCTGAATTGCCAAAGCCAGAGCTACCTAAAATCCCTGAAATGCCAAAGCCCGAACTACCTAAAGTCCCTGAGTTGCCTAAAATCCCCGAAATGCCAAAGCCCGAGCTACCTAAAGCTCCCGAGTTGCCTAAAATCCTTGAAATGCCAAAGCCTGAACTACCTAAAGCCCTTGAGTTGCCTAAGGTCCCTGAATTGCCAAAACCTGAGCTACCTAAGCTTAATGTCCCTGAATTGCCAAAGCCTGAGCAACCTAAAGTCCCTGAGTTGCCTAAGGTCCCTGAAATGCCTAAAATCCCTGAAATGCCAAAGCCTGAACTACCTAAAGCCCCTGAGTTGCCTAAGGTCCCTNANATGCCAAAGCTTGAACTACCTACGCTTAATGTCCCTGAGTTGCCAAAGCCTGAGCAACCTAAAGTCCCTGAGTTGCCTAAGGTCCCCNAAATGCCTAAAATCCCTNAAATGCCAAAGCCTGAACTACCTAAGTTTAATGTCCCTGAGTTGCCAAAGCCTGAACTACCTAAANCCCCTGAGTTGCCTAAGATNCCTGAAATGCCAAAGCCCGAGCTACCTATAGCCCCTGAGTTCCCAAAGCCTGAGCTACCTAAGGTTGATGTCCCAGAATTGCCTAAACCTAACCTGCCTAAAGTCCCTGAGTTGCCCAAGTTCCCTCAAGTGCCTAAAGCCCCTGAAATTCCTAAAGCCATTCCAACCACCAGTCCTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00755	81015	87709	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0003824 catalytic activity

GO:0030151 molybdenum ion binding

GO:0030170 pyridoxal phosphate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000755s00017993.1	PF03476.11	MOSC_N	15	143	2.30E-37
Glyur000755s00017993.1	PF03473.12	MOSC	165	306	3.90E-26

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	19.250
SRR1783600	control	19.807
SRR1783602	moderate drought stress	19.625
SRR1811619	moderate drought stress	19.921

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.551
DRR006520	Root Summer glycyrrhizin high producing strain	12.454
DRR006521	Root Winter glycyrrhizin high producing strain	41.430
DRR006522	Root Winter glycyrrhizin high producing strain	39.603
DRR006523	Root Summer glycyrrhizin low producing strain	17.870
DRR006524	Root Summer glycyrrhizin low producing strain	18.642
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.843
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.067

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	67.743
SRR2868004	Drought Stress (root)	32.691
SRR2967015	Control (root)	39.265

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.641
SRR9715740	Leaf	9.185
SRR9715741	Leaf	13.202
SRR9715739	Root	30.440
SRR9715742	Root	16.570
SRR9715743	Root	19.129

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	22.057
SRR8749028	MeJA induced 9h	23.983
SRR8749029	MeJA induced 9h	21.084
SRR8749030	Uninduced	26.814
SRR8749031	Uninduced	50.166
SRR8749032	Uninduced	17.638

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	46.267
SRR8400027	Control - Root	34.534