Gene detail information of Glyur000755s00017980 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AFK46581.1 | 2.14E-60 | unknown [Lotus japonicus] |
| COG | YP_004320956.1 | 6.00E-09 | LPXTG-motif cell wall anchor domain-containing protein [Aerococcus urinae ACS-120-V-Col10a] |
| trEMBL | tr|I3T239|I3T239_LOTJA | 8.00E-61 | Uncharacterized protein {ECO:0000313|EMBL:AFK46581.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00755 | 38526 | 39155 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 54.300 |
| SRR1783600 | control | 58.582 |
| SRR1783602 | moderate drought stress | 47.950 |
| SRR1811619 | moderate drought stress | 60.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.281 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.566 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.501 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.243 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.211 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.472 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.243 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 138.817 |
| SRR2868004 | Drought Stress (root) | 63.702 |
| SRR2967015 | Control (root) | 62.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.767 |
| SRR9715740 | Leaf | 1.894 |
| SRR9715741 | Leaf | 1.835 |
| SRR9715739 | Root | 82.264 |
| SRR9715742 | Root | 37.506 |
| SRR9715743 | Root | 52.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.288 |
| SRR8749028 | MeJA induced 9h | 22.518 |
| SRR8749029 | MeJA induced 9h | 15.178 |
| SRR8749030 | Uninduced | 22.665 |
| SRR8749031 | Uninduced | 28.419 |
| SRR8749032 | Uninduced | 12.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 214.039 |
| SRR8400027 | Control - Root | 186.010 |