Gene detail information of Glyur000754s00024697 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G03115.1 | 4.00E-94 | Mitochondrial substrate carrier family protein |
| NR | XP_007144571.1 | 7.68E-175 | hypothetical protein PHAVU_007G166800g [Phaseolus vulgaris] |
| Swissprot | tr|O81845|PUMP1_ARATH | 2.00E-43 | Mitochondrial uncoupling protein 1 |
| trEMBL | tr|V7BG77|V7BG77_PHAVU | 3.00E-175 | Uncharacterized protein {ECO:0000313|EMBL:ESW16565.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00754 | 60871 | 63949 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000754s00024697.1 | PF00153.22 | Mito_carr | 28 | 114 | 8.10E-18 |
| Glyur000754s00024697.1 | PF00153.22 | Mito_carr | 124 | 212 | 1.10E-21 |
| Glyur000754s00024697.1 | PF00153.22 | Mito_carr | 219 | 282 | 2.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.170 |
| SRR1783600 | control | 3.150 |
| SRR1783602 | moderate drought stress | 4.530 |
| SRR1811619 | moderate drought stress | 4.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.742 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.795 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.769 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.711 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.910 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.294 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.244 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.856 |
| SRR2868004 | Drought Stress (root) | 3.964 |
| SRR2967015 | Control (root) | 5.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.291 |
| SRR9715740 | Leaf | 5.054 |
| SRR9715741 | Leaf | 5.788 |
| SRR9715739 | Root | 1.854 |
| SRR9715742 | Root | 3.098 |
| SRR9715743 | Root | 1.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.610 |
| SRR8749028 | MeJA induced 9h | 3.895 |
| SRR8749029 | MeJA induced 9h | 1.823 |
| SRR8749030 | Uninduced | 3.011 |
| SRR8749031 | Uninduced | 1.212 |
| SRR8749032 | Uninduced | 1.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.971 |
| SRR8400027 | Control - Root | 7.909 |