Gene detail information of Glyur000754s00024691 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47930.1 | 7.00E-04 | arabinogalactan protein 26 |
| NR | XP_007144563.1 | 6.29E-49 | hypothetical protein PHAVU_007G166400g [Phaseolus vulgaris] |
| Swissprot | tr|Q94F57|AGP26_ARATH | 3.00E-06 | Classical arabinogalactan protein 26 (Precursor) |
| trEMBL | tr|V7BFE8|V7BFE8_PHAVU | 2.00E-49 | Uncharacterized protein {ECO:0000313|EMBL:ESW16557.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00754 | 24674 | 25063 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 133.784 |
| SRR1783600 | control | 135.719 |
| SRR1783602 | moderate drought stress | 74.247 |
| SRR1811619 | moderate drought stress | 77.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 99.896 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 89.515 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.211 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.913 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 51.380 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.769 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.162 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.727 |
| SRR2868004 | Drought Stress (root) | 12.626 |
| SRR2967015 | Control (root) | 14.613 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.998 |
| SRR9715740 | Leaf | 5.448 |
| SRR9715741 | Leaf | 7.253 |
| SRR9715739 | Root | 20.910 |
| SRR9715742 | Root | 14.906 |
| SRR9715743 | Root | 16.075 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.124 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.017 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 78.742 |
| SRR8400027 | Control - Root | 76.311 |