Gene detail information of Glyur000754s00024690 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G03470.2 | 5.00E-33 | Kinase interacting (KIP1-like) family protein |
| NR | XP_004495995.1 | 1.62E-137 | PREDICTED: uncharacterized protein PF11_0207-like [Cicer arietinum] |
| trEMBL | tr|K7MZF8|K7MZF8_SOYBN | 6.00E-128 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39385.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00754 | 21562 | 24224 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000754s00024690.1 | PF07765.7 | KIP1 | 51 | 124 | 2.10E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.345 |
| SRR1783600 | control | 3.385 |
| SRR1783602 | moderate drought stress | 6.051 |
| SRR1811619 | moderate drought stress | 6.215 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.691 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.627 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 163.768 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 160.014 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.710 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.730 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.422 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.994 |
| SRR2868004 | Drought Stress (root) | 1.170 |
| SRR2967015 | Control (root) | 1.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.856 |
| SRR9715740 | Leaf | 5.548 |
| SRR9715741 | Leaf | 2.511 |
| SRR9715739 | Root | 0.371 |
| SRR9715742 | Root | 1.518 |
| SRR9715743 | Root | 1.986 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.016 |
| SRR8749028 | MeJA induced 9h | 70.559 |
| SRR8749029 | MeJA induced 9h | 76.671 |
| SRR8749030 | Uninduced | 22.453 |
| SRR8749031 | Uninduced | 5.324 |
| SRR8749032 | Uninduced | 15.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.204 |
| SRR8400027 | Control - Root | 2.316 |