Gene detail information of Glyur000753s00021296.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26300.1 | 2.00E-70 | Arginyl-tRNA synthetase, class Ic |
| NR | XP_004513062.1 | 3.44E-95 | PREDICTED: arginine--tRNA ligase, cytoplasmic-like isoform X2 [Cicer arietinum] |
| COG | YP_003710058.1 | 3.00E-40 | Arginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] |
| trEMBL | tr|I1LA73|I1LA73_SOYBN | 3.00E-91 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G17590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00753 | 118647 | 121113 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01887 | RARS, argS | EC:6.1.1.19 | Aminoacyl-tRNA biosynthesis | map00970 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000753s00021296.1 | PF05746.10 | DALR_1 | 30 | 145 | 5.10E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.828 |
| SRR1783600 | control | 8.815 |
| SRR1783602 | moderate drought stress | 8.518 |
| SRR1811619 | moderate drought stress | 8.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.387 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.800 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.788 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.397 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.088 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.908 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.606 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.625 |
| SRR2868004 | Drought Stress (root) | 12.673 |
| SRR2967015 | Control (root) | 11.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.268 |
| SRR9715740 | Leaf | 36.391 |
| SRR9715741 | Leaf | 23.861 |
| SRR9715739 | Root | 2.323 |
| SRR9715742 | Root | 7.603 |
| SRR9715743 | Root | 7.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.889 |
| SRR8749028 | MeJA induced 9h | 16.185 |
| SRR8749029 | MeJA induced 9h | 34.037 |
| SRR8749030 | Uninduced | 25.089 |
| SRR8749031 | Uninduced | 20.476 |
| SRR8749032 | Uninduced | 18.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.097 |
| SRR8400027 | Control - Root | 15.747 |