Gene detail information of Glyur000753s00021295 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00753 | 113201 | 113945 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000753s00021295.1 | PF13456.1 | RVT_3 | 1 | 70 | 2.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.066 |
| SRR1783600 | control | 21.587 |
| SRR1783602 | moderate drought stress | 59.696 |
| SRR1811619 | moderate drought stress | 58.539 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.797 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.913 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 52.082 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 50.663 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.604 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.198 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.269 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.227 |
| SRR2868004 | Drought Stress (root) | 11.172 |
| SRR2967015 | Control (root) | 12.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.381 |
| SRR9715740 | Leaf | 4.157 |
| SRR9715741 | Leaf | 6.648 |
| SRR9715739 | Root | 2.736 |
| SRR9715742 | Root | 10.355 |
| SRR9715743 | Root | 8.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.180 |
| SRR8749028 | MeJA induced 9h | 60.566 |
| SRR8749029 | MeJA induced 9h | 31.524 |
| SRR8749030 | Uninduced | 6.281 |
| SRR8749031 | Uninduced | 8.055 |
| SRR8749032 | Uninduced | 14.691 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.726 |
| SRR8400027 | Control - Root | 15.805 |