Gene detail

Gene detail information of Glyur000753s00021291

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G56580.1	2.00E-169	MAP kinase kinase 6
NR	XP_003535888.1	0	PREDICTED: mitogen-activated protein kinase kinase 6-like [Glycine max]
COG	YP_003523895.1	5.00E-21	serine/threonine protein kinase [Sideroxydans lithotrophicus ES-1]
Swissprot	tr\|Q9FJV0\|M2K6_ARATH	0	Mitogen-activated protein kinase kinase 6
trEMBL	tr\|K7LII3\|K7LII3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G15850.2}

Sequence

Transcript Sequence

>Glyur000753s00021291.1
CTTTTGTTCAGTCACTGTGTCTGTGCGTTGTGAAACTGCAAATCATTGAAGACAGTGAAATCACTGAACAACGAAGAAGATGAAGACCAAGACGCCATTGAAGCAGCTGAAGCTAGCGGTTCCTGCTCAACAATCCCCCATCACCTCCTTCCTGACTGCAAGTGGCACGTTCCATGATGGAGATCTGCTCTTAAACCAGAAAGGGTTGCGTCTCATCTCTGAAGAAAAGGAATCACGACCTTCAGATGGTAAGGAGCTGGAATTTGACTTCTCGCTGGACGACCTTGAGACCATCAAAGTAATTGGAAAAGGCAGTGGTGGTTTAGTACAACTTGTTCGCCATAAGTGGGTTGGAAAATTGTTTGCTTTAAAGGTCATTCAGATGAATATACAAGAGGATATTCGAAAACAGATTGTTCAGGAACTGAAAATAAACCAAGCATCACAGTGTCCACATGTTGTAGTCTGCTACCACTCATTCTATCATAACGGAGTTATATCTCTTGTATTAGAGTACATGGATCGGGGTTCTCTAGCAGATGTAATNAGACAAGTTAAAACAATTCTGGAACCATATCTTGCTATGGTTTGTAAGCAGGTATTACAAGGCCTTGTTTACTTGCATAATGAAAGACATGTAATACATAGGGACATCAAACCATCCAATCTATTAGTCAATCACAAAGGGGAGGTGAAGATTACTGATTTTGGTGTTAGTGCTATGCTGGCAACCTCAATGGGCCAAAGAGATACATTTGTTGGAACTTACAACTACATGTCGGTGAGTAACTTTTCTNTCTTTAGTTTGGGCATGGTAGTACTTGAGTGTGCCATAGGACGGTTTCCTTATATACAATCCGAAGATCAGCAAGCATGGCCTAGTTTCTATGAGCTTTTGGCAGCAATTGTGGAAAGCCCCCCGCCATCTGCTCCAATTGATCAGTTCTCCCCAGAGTTCTGTTCATTTGTGTCATCCTGCATCCAAAAGGATCCTCGGGATAGATTGACATCCTTGGAGCTTCTGGATCATCCTTTCATTAAAAAGTTTGAAGATAAAGATCTAGATCTTGGGATTTTAGTAGGTAGCTTGGAACCTCCTATAAATTTTCCCAGATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00753	94678	98180	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.1.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K04368	MAP2K1, MEK1	EC:2.7.12.2	Ras signaling pathway	map04014
			Rap1 signaling pathway	map04015
			MAPK signaling pathway	map04010
			MAPK signaling pathway - fly	map04013
			ErbB signaling pathway	map04012
			VEGF signaling pathway	map04370
			TNF signaling pathway	map04668
			HIF-1 signaling pathway	map04066
			FoxO signaling pathway	map04068
			Phospholipase D signaling pathway	map04072
			Sphingolipid signaling pathway	map04071
			cAMP signaling pathway	map04024
			cGMP - PKG signaling pathway	map04022
			PI3K-Akt signaling pathway	map04151
			mTOR signaling pathway	map04150
			Autophagy - animal	map04140
			Oocyte meiosis	map04114
			Apoptosis	map04210
			Focal adhesion	map04510
			Gap junction	map04540
			Signaling pathways regulating pluripotency of stem cells	map04550
			Regulation of actin cytoskeleton	map04810
			Toll-like receptor signaling pathway	map04620
			Natural killer cell mediated cytotoxicity	map04650
			T cell receptor signaling pathway	map04660
			B cell receptor signaling pathway	map04662
			Fc epsilon RI signaling pathway	map04664
			Fc gamma R-mediated phagocytosis	map04666
			Chemokine signaling pathway	map04062
			Insulin signaling pathway	map04910
			GnRH signaling pathway	map04912
			Estrogen signaling pathway	map04915
			Progesterone-mediated oocyte maturation	map04914
			Prolactin signaling pathway	map04917
			Oxytocin signaling pathway	map04921
			Thyroid hormone signaling pathway	map04919
			Melanogenesis	map04916
			Vascular smooth muscle contraction	map04270
			Cholinergic synapse	map04725
			Serotonergic synapse	map04726
			Long-term potentiation	map04720
			Long-term depression	map04730
			Neurotrophin signaling pathway	map04722
			Dorso-ventral axis formation	map04320
			Osteoclast differentiation	map04380
			Plant-pathogen interaction	map04626
			Pathways in cancer	map05200
			Central carbon metabolism in cancer	map05230
			Choline metabolism in cancer	map05231
			MicroRNAs in cancer	map05206
			Proteoglycans in cancer	map05205
			Colorectal cancer	map05210
			Pancreatic cancer	map05212
			Glioma	map05214
			Thyroid cancer	map05216
			Acute myeloid leukemia	map05221
			Chronic myeloid leukemia	map05220
			Melanoma	map05218
			Renal cell carcinoma	map05211
			Bladder cancer	map05219
			Prostate cancer	map05215
			Endometrial cancer	map05213
			Breast cancer	map05224
			Non-small cell lung cancer	map05223
Prion diseases	map05020
Alcoholism	map05034
Influenza A	map05164
Hepatitis B	map05161
EGFR tyrosine kinase inhibitor resistance	map01521
Endocrine resistance	map01522

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000753s00021291.1	PF00069.20	Pkinase	70	320	4.50E-50

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.055
SRR1783600	control	3.092
SRR1783602	moderate drought stress	1.479
SRR1811619	moderate drought stress	1.618

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.522
DRR006520	Root Summer glycyrrhizin high producing strain	9.482
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	21.793
DRR006524	Root Summer glycyrrhizin low producing strain	22.849
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.097
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.187

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.511
SRR2868004	Drought Stress (root)	6.942
SRR2967015	Control (root)	7.175

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.320
SRR9715740	Leaf	1.037
SRR9715741	Leaf	1.743
SRR9715739	Root	1.302
SRR9715742	Root	3.026
SRR9715743	Root	2.095

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	27.709
SRR8749028	MeJA induced 9h	17.316
SRR8749029	MeJA induced 9h	16.885
SRR8749030	Uninduced	3.647
SRR8749031	Uninduced	1.297
SRR8749032	Uninduced	4.088

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.363
SRR8400027	Control - Root	10.136