Gene detail

Gene detail information of Glyur000753s00021282

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G29260.1	1.00E-75	HAD superfamily, subfamily IIIB acid phosphatase
NR	XP_004513069.1	3.84E-143	PREDICTED: acid phosphatase 1-like [Cicer arietinum]
COG	YP_004217721.1	7.00E-29	acid phosphatase (class B) [Granulicella tundricola MP5ACTX9]
Swissprot	tr\|P27061\|PPA1_SOLLC	5.00E-87	Acid phosphatase 1 (Precursor)
trEMBL	tr\|V7C477\|V7C477_PHAVU	6.00E-136	Uncharacterized protein {ECO:0000313\|EMBL:ESW24949.1}

Sequence

Transcript Sequence

>Glyur000753s00021282.1
ATGAACCTTACATGGAAATGAATCGTCGTCGTTAAATGTACGGAACATTGTGGCCACAAAAACGTTTCTCAGTTTCTCTTATGATCTGAGAAACACAAAAGTGGGGGGAAAGAGAAGTCGCCGGAAACCATTTTTCTATTTTCCGGCGATGGATTCCGGCGCGTCGTTCCTGTTGCTGCTGCTGTTGGTCTCAACGATCGGCCACATTCGTTCTGAATCGGAGATCAGGCTACCGTCGGAAGAGGATATCCCCGGCGAGTACTGCGAGAGCTGGAGGCTGGCGGTGGAGACGAACAACGCGGGATCGTGGAAGCGCGTGCCGGCGAGTTGCGTGGGGCTTGTGGCGGAATACATGGTTGGGGAACGGTACAAGAGAGACAGCGAGGTCGTTGGGGAATACTCGTCGGCGTTTGCGAGGCGCGTGGCGTTGGGAGGTGACGGAAGAGACGCGTGGGTGTTCGACATCGATGAGACGCTTCTCTCCAATGTGCCATACTACCAAGCCGTCGGATTCGGGTCACAGGTCTTCAATGAGACATCCTTCGACAATTGGGTGAACATGGCTGATGCCCCAGCACTGACAGCCAGTTTCAGTTTGTATAAAGAGCTTCAGGAACTGGGTTTCAAGATATTTCTCTTGACTGGGAGGAGTGAGCATCAAAGGAATGCCACGGAGGCAAACCTTCTATTTGCAGGGTACAGAAACTGGGAGAGGCTCATCTTAAGAGGCTCTTCTGATCAAGGCAAACCAGCAACCAGTTTCAAGTCTGAGAAGAGAGAAGAGTTGGTGAATGAAGGCTATAGGATCCATGGCAGCTCTGGGGATCAGTGGAGTGATCTGTGGGGTTATGCAGTGGCCTCACGTTCTTTTAAACTCCCAAACCCAATGTATTATATTGCTTAACATTGAAAACGGCTTCTCCAGTCCATATTCATTTTTTCATGATTGCTTGTGCCTTGTTGTAACATCTGTTAATGATTTTTCATGGTAAAATTATGCTTGTTACGACACGGATTGTGAGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00753	49924	52027	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0003993 acid phosphatase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000753s00021282.1	PF03767.9	Acid_phosphat_B	35	250	1.40E-67

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.104
SRR1783600	control	7.196
SRR1783602	moderate drought stress	4.821
SRR1811619	moderate drought stress	4.975

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	27.548
DRR006520	Root Summer glycyrrhizin high producing strain	27.185
DRR006521	Root Winter glycyrrhizin high producing strain	8.404
DRR006522	Root Winter glycyrrhizin high producing strain	8.088
DRR006523	Root Summer glycyrrhizin low producing strain	24.642
DRR006524	Root Summer glycyrrhizin low producing strain	24.941
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.467
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.626

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	75.616
SRR2868004	Drought Stress (root)	54.832
SRR2967015	Control (root)	41.797

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.523
SRR9715740	Leaf	11.235
SRR9715741	Leaf	16.109
SRR9715739	Root	27.551
SRR9715742	Root	16.961
SRR9715743	Root	18.975

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	25.010
SRR8749028	MeJA induced 9h	18.290
SRR8749029	MeJA induced 9h	25.484
SRR8749030	Uninduced	12.864
SRR8749031	Uninduced	13.771
SRR8749032	Uninduced	29.640

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	49.424
SRR8400027	Control - Root	53.394