Gene detail

Gene detail information of Glyur000753s00021274.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G29210.1	1.00E-171	gamma-glutamyl transpeptidase 4
NR	XP_004513075.1	0	PREDICTED: gamma-glutamyltranspeptidase 3-like [Cicer arietinum]
COG	YP_001866156.1	3.00E-84	gamma-glutamyltransferase [Nostoc punctiforme PCC 73102]
Swissprot	tr\|Q9M0G0\|GAGT3_ARATH	0	Gamma-glutamyltranspeptidase 3
trEMBL	tr\|I1KJR9\|I1KJR9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G15150.1}

Sequence

Transcript Sequence

>Glyur000753s00021274.1
CTGATGATAAACGTGCTTTGTTTTGTTGCATAAAAGATAATCAAAATGGGGTTGCTTGCAACTGAATGAATCTTAGCACTTAGCAGAGAGAGAGAGAGAGAGAGAGAGAGATAAAATATCCAGCAGTAGCAGCAGCCAATTGTTGAAGAGAATATTATGCAGAGGCCGTTCTGAATCTTCACAAGTCAAAACATTCAAAGACCAACCAACAACTCCTATTCTCTCTGTTTTTCTCACTCTGTTCAATGTCTCAAGTGTTCCACTGAGCTTCTAACTGCTCCTTCAATACTAATAGTCCTTCATCATCATTAATATCAACAACGGATTCTCATTCCCCTTTGTTGGGACCCCATCTTTTGCCCAACAAACACAAAAAACGCCACAACATCATCTTTCTCTGCTTCCTTCTCCTCTTTGTCGCTTTCACCATTGTTGGGCTAGCAGTAAGAGGCAACACAAGTTTTGGGATACTGAAAGGGGCAGAAAAATACAATGAGGGAACAAGAGCCAATCAGGGAGATGTTATTGAATCAAAAGTTGGAGTTGTTGCAGCTGATGATGCCAGGTGTTCTGCAGTTGGTGTTTCAATGCTTAGGCTGGGTGGNCATGCTGTTGATGCTGCAGTGGCCACTGCATTATGCCTTGGTGTTGTTTTCTCAGCTTCAAGTGGCATAGGAGGTGGCTCTTTCATGGTTGTCCGGTCTTCTTCAACCTCCAAAACCCAAGCTTTTGACATGAGAGAAACTGCTCCTTTAGCTGCTTCACAGAATATGTATCAGAGCAATCCAGAAGCTAAGACCTTAGGTGCCTTGTCCATGGGAGTTCCTGGTGAGTTAGCTGGACTTCATGCAGCATGGTTGAAGCATGGACGATTGCCATGGAAGACCTTATTCCAACCAGCTATAGTACTTGCCAAAAATGGTTTTGTAGTGTCTCCTACTCTTGGAGATTACATAGCTAAAGATGAAAATAAGATAATGAATGATCCTGGGTTAAGGAACATATATGCACCTAATGGAACTTTGTTGAAAGGAGGGGAGATGTGTAGGAATGTGGAACTTGGTCACACCTTAGAGGTAGTGGCAGAGCAAGGGCCACAAGTTTTCTACAATGGAACCATTGGTGAGAAGCTAGTAAAGGATGTCAGAGAAGCTGGTGGGATTTTAACAATGGAGGACTTGCGCAATTACAAGGTGGAGATTACAGATGCAGTGACTGTGAATGTCCTAAACATCTTGGACAGTTATGGAGATACTCCTGATGCTGTAAAGGGAAATCTGGGTACACATCGACTAATAGAAGCTCTGAAACATATGTTTGCTGTCCGAATGAACTTGGGGGACCCTGACTTTGAAAACATTAGTGCTACTGTATCTGAAATGCTCTCACCATCTTTTGCACAAACTATTCAGCACAAGATACTTGATAACACTACTTTCCCTCCAGATTACTATATGAACAGAGATCATGGAACGAGCCATTTGTGTGTTGTGGATGCTGATAGAAATGCTGTATCACTGACAACAAGTGTGAACTATCATTTTGGAGCTGGGGTTCGTTCTACTTCAACTGGTATTGTGATCAACAATCAGATGGATGACTTCTCTACACCCACTGAGATATCCCCTGAAAAACTACCTCCAGCTCCAACAAATTTCATTGAACCAAACAAAAGACCATTGTCTTCCATGACTCCTATTATCATCACTAAGGATGACCAGTTAGTTGGGGTAATTGGAGGCAGTGGTGGAATGAACATTATTTCAGCAGTGACACAAGTCTTTCTAAATCATTTCATCTTGGGAATGCAACCTTTGGATGCAGTTCTAAGGCCAAGGGTCTATACCAAGCTAATACCGGATGTAGTTNGCTATGAGAACTTGACTGCNCATGATGGTGATCACATTGAGCTTTCAGAAGANAGTAAGCTTTTCCTGGAAGAGAGAGGTCATCAACTGCGTGTGTCTCCAGCACTAGCTGTCACTCAGCTTATTGTCCAAACTCTCAAAACACCTATTAGCAGCATTACTAATAGGAAAACCGGTGAAGGCACTGGTTCACGGGTAAATCATGGCACTCTAACC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00753	4856	10118	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K18592	GGT1_5, CD224	EC:2.3.2.2 3.4.19.13 3.4.19.14	Arachidonic acid metabolism	map00590
			Taurine and hypotaurine metabolism	map00430
			Cyanoamino acid metabolism	map00460
			Glutathione metabolism	map00480

Gene Ontology

biological_process
GO:0006749 glutathione metabolic process

molecular_function
GO:0003840 gamma-glutamyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000753s00021274.1	PF01019.16	G_glu_transpept	1	212	1.20E-79

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	20.319
SRR1783600	control	20.433
SRR1783602	moderate drought stress	33.206
SRR1811619	moderate drought stress	32.331

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	24.617
DRR006520	Root Summer glycyrrhizin high producing strain	24.283
DRR006521	Root Winter glycyrrhizin high producing strain	1.794
DRR006522	Root Winter glycyrrhizin high producing strain	1.991
DRR006523	Root Summer glycyrrhizin low producing strain	13.986
DRR006524	Root Summer glycyrrhizin low producing strain	14.482
DRR006525	Leaf Summer glycyrrhizin high producing strain	20.962
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.398

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	42.694
SRR2868004	Drought Stress (root)	39.043
SRR2967015	Control (root)	58.252

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	21.776
SRR9715740	Leaf	27.330
SRR9715741	Leaf	15.251
SRR9715739	Root	4.521
SRR9715742	Root	18.350
SRR9715743	Root	15.485

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.723
SRR8749028	MeJA induced 9h	5.693
SRR8749029	MeJA induced 9h	1.520
SRR8749030	Uninduced	7.225
SRR8749031	Uninduced	2.364
SRR8749032	Uninduced	6.151

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	33.959
SRR8400027	Control - Root	33.726