Gene detail information of Glyur000753s00021273.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G19800.1 | 8.00E-72 | myo-inositol oxygenase 2 |
| NR | NP_001241072.1 | 9.02E-111 | uncharacterized protein LOC100794523 [Glycine max] |
| Swissprot | tr|O82200|MIOX2_ARATH | 7.00E-87 | Inositol oxygenase 2 |
| trEMBL | tr|C6TN32|C6TN32_SOYBN | 3.00E-111 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G00840.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00753 | 480 | 3601 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00469 | MIOX | EC:1.13.99.1 | Ascorbate and aldarate metabolism | map00053 |
| Inositol phosphate metabolism | map00562 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000753s00021273.1 | PF05153.10 | DUF706 | 66 | 102 | 2.10E-05 |
| Glyur000753s00021273.1 | PF05153.10 | DUF706 | 125 | 236 | 1.50E-32 |
| Glyur000753s00021273.1 | PF05153.10 | DUF706 | 258 | 317 | 6.60E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.038 |
| SRR1783600 | control | 0.027 |
| SRR1783602 | moderate drought stress | 0.020 |
| SRR1811619 | moderate drought stress | 0.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.185 |
| SRR2868004 | Drought Stress (root) | 0.254 |
| SRR2967015 | Control (root) | 0.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.578 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.175 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.784 |
| SRR8400027 | Control - Root | 4.891 |