Gene detail information of Glyur000751s00027024 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G01900.1 | 5.00E-46 | DNAse I-like superfamily protein |
| NR | KEH26771.1 | 5.44E-112 | type I inositol-1,4,5-trisphosphate 5-phosphatase [Medicago truncatula] |
| Swissprot | tr|Q9LR47|IP5P3_ARATH | 3.00E-19 | Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 |
| trEMBL | tr|A0A072UBD0|A0A072UBD0_MEDTR | 2.00E-112 | Type I inositol-1,4,5-trisphosphate 5-phosphatase {ECO:0000313|EMBL:KEH26771.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00751 | 27045 | 30739 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000751s00027024.1 | PF03372.18 | Exo_endo_phos | 61 | 207 | 0.00028 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.157 |
| SRR1783600 | control | 13.352 |
| SRR1783602 | moderate drought stress | 16.844 |
| SRR1811619 | moderate drought stress | 17.134 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.632 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.031 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.640 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.582 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.023 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.897 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.133 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.610 |
| SRR2868004 | Drought Stress (root) | 1.635 |
| SRR2967015 | Control (root) | 1.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.864 |
| SRR9715740 | Leaf | 1.250 |
| SRR9715741 | Leaf | 1.080 |
| SRR9715739 | Root | 0.718 |
| SRR9715742 | Root | 5.222 |
| SRR9715743 | Root | 5.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.014 |
| SRR8749031 | Uninduced | 0.035 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.813 |
| SRR8400027 | Control - Root | 15.242 |