Gene detail

Gene detail information of Glyur000749s00022598

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G24570.1	2.00E-113	dicarboxylate carrier 2
NR	XP_004489761.1	0	PREDICTED: mitochondrial uncoupling protein 5-like [Cicer arietinum]
Swissprot	tr\|Q9SB52\|PUMP4_ARATH	4.00E-168	Mitochondrial uncoupling protein 4
trEMBL	tr\|G7JXQ1\|G7JXQ1_MEDTR	0	Dicarboxylate carrier protein {ECO:0000313\|EMBL:AES96036.1}

Sequence

Transcript Sequence

>Glyur000749s00022598.1
ATGGGAGTCAAAGGTTTCGTCGAAGGAGGCATCGCTTCCATCATCGCAGGATGTTCCACCCACCCACTAGACCTTATTAAGGTCCGCATGCAACTCCAGGGAGAACCCACCAACGCCGCCGCAAAACCCAACCCGGTTCAAGCACTCCGGCCGGCACTCGCCTTCCAAGCCGGATCCTCCTCCATCCACGTGGCGCATCCTCCTCCTCAACTACCCCAGCCTCGCGTGGGCCCAATCTCCGTCGGCGTCCGCCTCGTCCAGCAGGAAGGCGTCGCCGCACTCTTCTCCGGCGTCTCCGCCACCGTCCTCCGGCAGACGCTCTACTCCACCACCCGCATGGGCCTCTACGAAGTCCTCAAGAACAAGTGGACCGATCCAAACGCCGGAAGCCTGCCGCTGGGGAGGAAGATCGAGGCCGGACTTATCGCCGGCGGCGTGGGTGCCGCCGTCGGGAACCCCGCCGACGTGGCTATGGTACGGATGCAGGCCGACGGTAGGCTCCCGGCGGCGCAGAGGCGGAACTACAGTTCGGTGGTTGACGCGATCACGAGGATGGCGAAGCAGGAGGGCGTTGGTAGCCTGTGGCGCGGCTCATCGCTTACGGTGAACCGCGCTATGCTTGTGACGGCTTCCCAGCTGGCTTCGTACGACCAGTTCAAGGAGATGATTTTGGAGAAGGGTGTGATGCGTGACGGGCTTGGGACCCACGTGACAGCGAGTTTTGCGGCGGGATTTGTTGCGGCGGTTGCGTCTAACCCCGTCGATGTTATTAAGACGAGGGTGATGAACATGAAGGTGGAGCCCGGTGCTGAGCCACCCTATGCTGGCGCATTGGACTGTGCCCTCAAAACGGTGCGCTCCGAGGGTCCCTTGGCTCTCTACAAAGGGTTTATTCCTACCATTTCCAGGCAGGGACCATTCACCGTTGTGCTCTTCGTCACCCTCGAGCAGGTTCGCAAGTTGCTCAAGGATTTCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00749	75845	76822	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000749s00022598.1	PF00153.22	Mito_carr	4	124	1.20E-16
Glyur000749s00022598.1	PF00153.22	Mito_carr	132	225	2.80E-19
Glyur000749s00022598.1	PF00153.22	Mito_carr	233	324	6.80E-22

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	94.255
SRR1783600	control	95.552
SRR1783602	moderate drought stress	51.906
SRR1811619	moderate drought stress	52.492

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	492.688
DRR006520	Root Summer glycyrrhizin high producing strain	498.784
DRR006521	Root Winter glycyrrhizin high producing strain	6.690
DRR006522	Root Winter glycyrrhizin high producing strain	6.086
DRR006523	Root Summer glycyrrhizin low producing strain	877.042
DRR006524	Root Summer glycyrrhizin low producing strain	881.513
DRR006525	Leaf Summer glycyrrhizin high producing strain	133.599
DRR006526	Leaf Summer glycyrrhizin high producing strain	131.923

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	176.173
SRR2868004	Drought Stress (root)	170.270
SRR2967015	Control (root)	336.454

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1002.759
SRR9715740	Leaf	1000.651
SRR9715741	Leaf	1014.102
SRR9715739	Root	3156.797
SRR9715742	Root	1922.545
SRR9715743	Root	2111.270

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	823.592
SRR8749028	MeJA induced 9h	274.301
SRR8749029	MeJA induced 9h	433.177
SRR8749030	Uninduced	341.663
SRR8749031	Uninduced	151.383
SRR8749032	Uninduced	301.558

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	123.736
SRR8400027	Control - Root	273.308