Gene detail information of Glyur000748s00025527 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G29400.1 | 2.00E-171 | exocyst subunit exo70 family protein E1 |
| NR | XP_006585778.1 | 0 | PREDICTED: exocyst complex component EXO70B1-like [Glycine max] |
| Swissprot | tr|Q9FGH9|E70B1_ARATH | 2.00E-109 | Exocyst complex component EXO70B1 |
| trEMBL | tr|I1KWE6|I1KWE6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G26920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00748 | 80365 | 82383 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000748s00025527.1 | PF03081.10 | Exo70 | 289 | 657 | 1.40E-106 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.777 |
| SRR1783600 | control | 8.668 |
| SRR1783602 | moderate drought stress | 8.098 |
| SRR1811619 | moderate drought stress | 7.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.260 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.932 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.217 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.090 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.320 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.505 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.059 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 31.503 |
| SRR2868004 | Drought Stress (root) | 35.728 |
| SRR2967015 | Control (root) | 36.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.989 |
| SRR9715740 | Leaf | 13.354 |
| SRR9715741 | Leaf | 13.040 |
| SRR9715739 | Root | 12.690 |
| SRR9715742 | Root | 19.342 |
| SRR9715743 | Root | 18.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.341 |
| SRR8749028 | MeJA induced 9h | 3.506 |
| SRR8749029 | MeJA induced 9h | 2.063 |
| SRR8749030 | Uninduced | 5.377 |
| SRR8749031 | Uninduced | 2.389 |
| SRR8749032 | Uninduced | 2.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.913 |
| SRR8400027 | Control - Root | 23.641 |