Gene detail information of Glyur000748s00025520 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15870.1 | 1.00E-134 | glycosyl hydrolase family 81 protein |
| NR | XP_007139480.1 | 0 | hypothetical protein PHAVU_008G033000g [Phaseolus vulgaris] |
| COG | YP_008154648.1 | 5.00E-47 | hypothetical protein SCE1572_41440 [Sorangium cellulosum So0157-2] |
| trEMBL | tr|V7B0X4|V7B0X4_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW11474.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00748 | 47990 | 50295 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000748s00025520.1 | PF03639.8 | Glyco_hydro_81 | 9 | 389 | 4.80E-84 |
| Glyur000748s00025520.1 | PF03639.8 | Glyco_hydro_81 | 417 | 491 | 5.20E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.818 |
| SRR1783600 | control | 1.578 |
| SRR1783602 | moderate drought stress | 0.995 |
| SRR1811619 | moderate drought stress | 0.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.040 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.975 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.025 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.073 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.857 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.564 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.569 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.507 |
| SRR2868004 | Drought Stress (root) | 8.740 |
| SRR2967015 | Control (root) | 7.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.870 |
| SRR9715740 | Leaf | 15.190 |
| SRR9715741 | Leaf | 9.024 |
| SRR9715739 | Root | 8.120 |
| SRR9715742 | Root | 5.549 |
| SRR9715743 | Root | 5.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.187 |
| SRR8749028 | MeJA induced 9h | 27.284 |
| SRR8749029 | MeJA induced 9h | 10.597 |
| SRR8749030 | Uninduced | 5.645 |
| SRR8749031 | Uninduced | 18.939 |
| SRR8749032 | Uninduced | 5.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.439 |
| SRR8400027 | Control - Root | 7.264 |