Gene detail

Gene detail information of Glyur000748s00025515

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G39050.1	2.00E-72	HXXXD-type acyl-transferase family protein
NR	XP_003552578.1	0	PREDICTED: phenolic glucoside malonyltransferase 1-like [Glycine max]
Swissprot	tr\|Q940Z5\|PMAT1_ARATH	3.00E-87	Phenolic glucoside malonyltransferase 1
trEMBL	tr\|I1N4L1\|I1N4L1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G50310.1}

Sequence

Transcript Sequence

>Glyur000748s00025515.1
ATGATATTGATTAACTGTACATTAAAGTGGGATAGTAAAACAAATATATATATTAATTCTGTGAAGAGCTGCATCAAGATTCATGAGCACTGCAAAGTTGCTCCTCCTCCATCATGTGCAACCCAGTTATCTCTCCCTCTCACCTTCTTTGACTTGTTCTGGCTCAAGTTTCACCCAGTTGAACGCATNTTTTTCTACTCCCTTCCTCTCCCTCACTCACACCCCTCTTTCTTCTTCGACCAAGTGGTTCCAAAGCTCAAAACCTCACTCTCCCTTACTCTCCAACACTTCCTCCCTTTAGCTGGCAACATCGTTTGGCCTTCTGATTCCCCAAAACCCATCATCAGATTCAACCCTGACGGTGATGATATTGATGGGGTGTCCTTGGTCATAGCACAGTGTGATGATGACGTGGACTTATTCAATNAAATCTTGGAGTACAATTCACCCCGTGAAGCCATAGAGTCACGCACTTTGGTACCCCACTTGGAATCTTCGGATTCTGTTGCCTCTGTTATCTCCCTGCAGATAACCCTGTTCCCAAACAGANGCTTTTGTATTGGAATCACCACCCACCATGCTGTTCTTGATGGAAAGTCTTCAACCATGTTCATCAAGGCTTGGGCTTCTCTATGCAANTCCGGTGATGAAAAGTCAACACCTTTGGTGCAGGNGTTGGAGCCCTTTATGGAAAGGGAAGTCATCAAGGATCCAAATGGGCTTGAGAGTTTGTTCATAAACATGTGGAACCAAATCTCATCCCAATTTGGCCCTAATAATGATCATAACAACAGCAGCAACGGGAGAAGCTTGAAGATTATGCCAAACGCGTCTCAACAAATGGTGAAGGACTCAGCTAGAGCAACGTTCGAGCTGACACGTGGACATTTGGACAAGATAAACAAAAGGGTGTTATCCAAGTGGGACACAGTGGAAGGAGAAGGAGCACATTCAACGCCTAATACTTTGTCGACCTTTGTTCTTACCTGTGCTTACGTGTCCTTCTGCATTGCAAAAGCCATTCAGGAAGCAGAGAGGGACAAGAAACAGAAATTTGCTTTTGGTTTCACTGTGGATTGCAGGGCTAGGATGGAGCCTCCAATCCCTGAGAACTATTTTGGCAATTGTGTATCTAGTCATATAGTGGATACAGAGCCAGAGGATTTCACTAGGGAAGATGGGGTGGTAATTATTGCCAAGAAGATTCATGGTAAGATAAAGAAGTTGAATATTAAGGGAGCTCTTGATGGGGTAGAGACATTAAGGATTAGATTTATGGCTATGGTAAGTGAGGGAGTTAAAGGAATGGGAGTTGCTGGGTCAACCCGGTTTGGTGTTTATGAGACTGATTTTGGTTGGGGAAGGCCTGCAAAAGTTGAGATAACATCGGTGGATAGAGGGTTAACAATTGCGTTGGCAGAGAGCAAGGATGGNAATCTAGCATTAAATGTGATCGATGGTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00748	3335	5556	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000748s00025515.1	PF02458.10	Transferase	36	479	3.20E-44

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.338
SRR1783600	control	0.356
SRR1783602	moderate drought stress	0.589
SRR1811619	moderate drought stress	0.575

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.735
DRR006520	Root Summer glycyrrhizin high producing strain	0.726
DRR006521	Root Winter glycyrrhizin high producing strain	1.155
DRR006522	Root Winter glycyrrhizin high producing strain	0.907
DRR006523	Root Summer glycyrrhizin low producing strain	1.581
DRR006524	Root Summer glycyrrhizin low producing strain	1.360
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.313
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.163

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	3.101
SRR2868004	Drought Stress (root)	13.415
SRR2967015	Control (root)	4.777

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	17.784
SRR9715740	Leaf	11.598
SRR9715741	Leaf	26.146
SRR9715739	Root	0.320
SRR9715742	Root	0.958
SRR9715743	Root	0.752

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.395
SRR8749028	MeJA induced 9h	13.274
SRR8749029	MeJA induced 9h	4.809
SRR8749030	Uninduced	32.054
SRR8749031	Uninduced	25.028
SRR8749032	Uninduced	13.687

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.471
SRR8400027	Control - Root	1.674