Gene detail information of Glyur000747s00029084 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33420.1 | 2.00E-103 | Peroxidase superfamily protein |
| NR | KHM99800.1 | 5.31E-159 | Peroxidase 47 [Glycine soja] |
| Swissprot | tr|Q9SZB9|PER47_ARATH | 2.00E-128 | Peroxidase 47 (Precursor) |
| trEMBL | tr|I1L3N3|I1L3N3_SOYBN | 2.00E-159 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G28460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00747 | 10335 | 12734 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000747s00029084.1 | PF00141.18 | peroxidase | 61 | 241 | 4.90E-50 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.265 |
| SRR1783600 | control | 0.209 |
| SRR1783602 | moderate drought stress | 0.060 |
| SRR1811619 | moderate drought stress | 0.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.267 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.133 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.338 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.408 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.167 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.071 |
| SRR2868004 | Drought Stress (root) | 1.583 |
| SRR2967015 | Control (root) | 1.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.615 |
| SRR9715740 | Leaf | 6.130 |
| SRR9715741 | Leaf | 5.669 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.153 |
| SRR9715743 | Root | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.899 |
| SRR8749028 | MeJA induced 9h | 2.804 |
| SRR8749029 | MeJA induced 9h | 5.591 |
| SRR8749030 | Uninduced | 0.705 |
| SRR8749031 | Uninduced | 0.143 |
| SRR8749032 | Uninduced | 0.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.172 |
| SRR8400027 | Control - Root | 0.554 |