Gene detail information of Glyur000746s00026707 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17740.1 | 3.00E-15 | |
| NR | KHN43672.1 | 4.98E-37 | UPF0614 protein C14orf102-like protein [Glycine soja] |
| trEMBL | tr|V7C366|V7C366_PHAVU | 6.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:ESW24612.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00746 | 114987 | 120129 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.071 |
| SRR1783600 | control | 0.097 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.646 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.797 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.449 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.365 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.603 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.755 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.375 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.660 |
| SRR2868004 | Drought Stress (root) | 3.262 |
| SRR2967015 | Control (root) | 1.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.031 |
| SRR9715740 | Leaf | 12.291 |
| SRR9715741 | Leaf | 21.248 |
| SRR9715739 | Root | 3.257 |
| SRR9715742 | Root | 8.489 |
| SRR9715743 | Root | 8.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.030 |
| SRR8749028 | MeJA induced 9h | 3.029 |
| SRR8749029 | MeJA induced 9h | 5.483 |
| SRR8749030 | Uninduced | 3.741 |
| SRR8749031 | Uninduced | 2.048 |
| SRR8749032 | Uninduced | 2.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.535 |
| SRR8400027 | Control - Root | 16.782 |