Gene detail

Gene detail information of Glyur000746s00026700

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G59960.1	8.00E-83	NAD(P)-linked oxidoreductase superfamily protein
NR	CAA11226.1	0	chalcone reductase [Sesbania rostrata]
COG	YP_007977361.1	2.00E-61	oxidoreductase, aldo/keto reductase family [Thermotoga maritima MSB8]
Swissprot	tr\|E7C196\|MER_ERYCB	7.00E-126	Methylecgonone reductase
trEMBL	tr\|Q41399\|Q41399_SESRO	0	Chalcone reductase {ECO:0000313\|EMBL:CAA11226.1}

Sequence

Transcript Sequence

>Glyur000746s00026700.1
ATGGCAGGAAAGAAAATCCCAGAAGTGTTGTTGAACTCTGGACACAAAATGCCAGTTATTGGCATGGGAACTTCAGTGGATCCTCGTCCATCAAATGATGACCTTGCTTCCATCTTTGTTGATGCCATTGAAGTGGGGTACCGCCATTTCGACAGTGCTGCTGTGTATGGTACAGAAGAAGCCATAGGCATGGCTGTGGCCAAAGCTATAGATCAAGGCCTTATAAAGGGTAGAGATGAAGTTTTCATCACTTCAAAGCCATGGAACACAGATGCACACCATGACCTTATTCTGGGGATGGAGTATGTGGATCTTTATCTGATTCATTGGCCAGTGAGGTTGAGACATGATCTTGAAAACCCTGTAATTTTCTCCAAGGAAGATTTGCTGCCATTTGATATAGAAGGGACATGGAAAGCCATGGAAGAGTGTTACAAGTTGGGATTAGCAAAGTCTATTGGCATATGCAATTATGGTACCAAAAAACTAACCAAACTAATGGAAATAGCCANCATTCCCCCTGCAGTCAATCAGGTGGAAATGAACCCATCTTGGCAGCAAGAGAAACTTAGGGAGTTCTGCAAGCAGAAAGGAATTCATGTCAGTGCTTGGTCACCTCTTGGAGCTTACAAGGTATTTTGGGGTTCAGGAGCAGTCATGGAGAATAAAATCCTTNATGACATAGCAACAGCTAAAGGGAAGACCATAGCTCAGGTTGCACTTAGATGGGTGTACCAACAAGGTTCAAGTGCCATGGCTAAAAGCTTCAACAAGGAGAGGATGAAACAAAACATTGAAATATTTGATTTTGAGCTGAGTGAAGNAGATTTAGAGAAGATAAAGCAGATTCCACAGCACAGGCAATACACAGGAGACATGTGGCTATCTGAAAATGGGTCTTGCAAGACCTTGGAAGAACTTTGGGATGATGATGTTTGAAAATTTCCTCCAAGTTCAAACAAACTATATTGTAGGATATAAATAAGGAAAATAAACTTCATGATTTCAATTATTCCATATCATTAGCTTCTCTTATATTATTATGTATTAGCATGAGCAATCATGTTTGGGTCTGTCTTCAGGCTCCGTCTCCCATGTTCGAGTGTCCTAGAACGCTCACGGTGTGCATGTTGGTACATCGTAGTCCGTTATCAGCAATAACCGTTGATATGTTTTAGTTGAGATCAACGGCTGAGAGTCAACATAGATTTGACCTGTTATTTAAGTTTTAGAAATTTGTTAAAGTGGTCCCTGGATAGTATTCACTAAACAGTGTCAGTTTTAAATTTAAATGGGGTAATCAAGGAGACCTTCGAAGTTAGAATCCCATTTTTATTTGTCTGTAAGTGGAAAATACTGAGAACCCTCGAGGAAATGTGGAAGGTCTAGAGGAAAGGCTTTGGGTGAAGGAGCTGCAACACCGCAAACGAACCAGAGAAAGTGCCACACGTCGGTGAGCTGTGCTGTTTTTTTTTTGGTCAATGAGTTGTGTTGTTTATTTGGCTTTGTTTATATTGAACAGTGATGAATTGCCGGGTAAAGAAGACGATGAACAGTGATCAGAGCTNACCCATATTTTAATCCATGGTTCAAGTGACCCATCGGTTGGTAATGAAAATTTAAGCCCAAATATGAGGTGGTCTGTGCAAAATATAAGGGGCCATGAATTTTTGCCGAAGATCCTGGTCCATTTCGAATGTCTCCTTTNATTTAGTTTAGATTATCCCATTTAAATTTAAAACTGACACTGTTCATTAAATACTATCCAGGGACCACTTTAATAAATTTCAGAAACTTAAGATAATGTTGAATCTCAGCTGTTGATTTCTNTGAACACAAATCAATGGCAATTGATGATGAAGGTCTACTGTGTACTGCTGCATTTTGAAGTTGCACACTGTGAGCATCCTAGGACACTCGAACACGCTAGACAGCGCCCTGTCTTCATATATAGGCCTAGCTAACCTCAGTATTTACTTCACTAGTTTCCTTGATTTGAGACCTTGAGTTGAATAAGAGTGTGTGACATTTGTGTGAGAGGAGTGAGGATCTGGTGGTGCTGCATGCCTCGAAGATGTGAGAGCTATGTGGCTCTGCATATTTGTTTCAACTCCAAATAAAACAATATATTCTCAGTTTATCACTTGCTTAAGCTTTTGTGATTGTAGGCTTTTGTTTGTCTTACCATAACTGTAATAATTCAATATCAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00746	64282	67570	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function
GO:0016491 oxidoreductase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000746s00026700.1	PF00248.16	Aldo_ket_red	20	283	1.80E-43

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.395
SRR1783600	control	0.451
SRR1783602	moderate drought stress	1.269
SRR1811619	moderate drought stress	1.357

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	21.424
DRR006520	Root Summer glycyrrhizin high producing strain	21.141
DRR006521	Root Winter glycyrrhizin high producing strain	7.529
DRR006522	Root Winter glycyrrhizin high producing strain	7.109
DRR006523	Root Summer glycyrrhizin low producing strain	3.066
DRR006524	Root Summer glycyrrhizin low producing strain	3.288
DRR006525	Leaf Summer glycyrrhizin high producing strain	199.172
DRR006526	Leaf Summer glycyrrhizin high producing strain	196.897

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.065
SRR2868004	Drought Stress (root)	2.304
SRR2967015	Control (root)	0.641

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	68.138
SRR9715740	Leaf	69.129
SRR9715741	Leaf	71.247
SRR9715739	Root	0.777
SRR9715742	Root	5.216
SRR9715743	Root	4.546

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.210
SRR8749028	MeJA induced 9h	0.199
SRR8749029	MeJA induced 9h	0.373
SRR8749030	Uninduced	0.354
SRR8749031	Uninduced	0.113
SRR8749032	Uninduced	0.233

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	9.452
SRR8400027	Control - Root	8.728