Gene detail information of Glyur000746s00026692 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G59960.1 | 1.00E-09 | NAD(P)-linked oxidoreductase superfamily protein |
| NR | XP_004513330.1 | 1.33E-29 | PREDICTED: methylecgonone reductase-like isoform X1 [Cicer arietinum] |
| COG | YP_006805693.1 | 9.00E-09 | oxidoreductase [Nocardia brasiliensis ATCC 700358] |
| Swissprot | tr|E7C196|MER_ERYCB | 6.00E-17 | Methylecgonone reductase |
| trEMBL | tr|K7MJ21|K7MJ21_SOYBN | 9.00E-27 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G34580.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00746 | 36793 | 37002 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000746s00026692.1 | PF00248.16 | Aldo_ket_red | 28 | 68 | 0.00012 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.070 |
| SRR1783600 | control | 24.324 |
| SRR1783602 | moderate drought stress | 14.203 |
| SRR1811619 | moderate drought stress | 11.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.562 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.424 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.776 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.371 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.419 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.473 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.756 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.101 |
| SRR2868004 | Drought Stress (root) | 0.257 |
| SRR2967015 | Control (root) | 0.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.827 |
| SRR9715740 | Leaf | 2.108 |
| SRR9715741 | Leaf | 2.091 |
| SRR9715739 | Root | 2.389 |
| SRR9715742 | Root | 1.510 |
| SRR9715743 | Root | 1.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.200 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.190 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.621 |
| SRR8400027 | Control - Root | 3.578 |