Gene detail information of Glyur000744s00021946 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20240.1 | 2.00E-32 | K-box region and MADS-box transcription factor family protein |
| NR | NP_001235385.1 | 3.20E-76 | uncharacterized protein LOC100499997 [Glycine max] |
| Swissprot | tr|Q03378|GLOB_ANTMA | 5.00E-50 | Floral homeotic protein GLOBOSA |
| trEMBL | tr|C6SZ76|C6SZ76_SOYBN | 1.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G24590.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00744 | 111321 | 113907 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000744s00021946.1 | PF01486.12 | K-box | 14 | 75 | 4.10E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.845 |
| SRR1783600 | control | 6.048 |
| SRR1783602 | moderate drought stress | 1.305 |
| SRR1811619 | moderate drought stress | 1.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.370 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.456 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.417 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.497 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.190 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 65.016 |
| SRR2868004 | Drought Stress (root) | 88.328 |
| SRR2967015 | Control (root) | 73.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.258 |
| SRR9715740 | Leaf | 0.302 |
| SRR9715741 | Leaf | 2.516 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 41.439 |
| SRR9715743 | Root | 29.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.084 |
| SRR8749031 | Uninduced | 0.101 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.425 |
| SRR8400027 | Control - Root | 3.796 |