Gene detail information of Glyur000744s00021936 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77380.1 | 2.00E-167 | amino acid permease 3 |
| NR | XP_006596218.1 | 0 | PREDICTED: amino acid permease 3-like isoform X1 [Glycine max] |
| Swissprot | tr|Q39134|AAP3_ARATH | 0 | Amino acid permease 3 |
| trEMBL | tr|K7M6Z0|K7M6Z0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G24370.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00744 | 44135 | 57466 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000744s00021936.1 | PF01490.13 | Aa_trans | 39 | 428 | 1.00E-95 |
| Glyur000744s00021936.1 | PF01490.13 | Aa_trans | 578 | 808 | 9.30E-64 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.520 |
| SRR1783600 | control | 0.498 |
| SRR1783602 | moderate drought stress | 0.914 |
| SRR1811619 | moderate drought stress | 0.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.489 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.435 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.300 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.834 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 94.404 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 95.762 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.059 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.237 |
| SRR2868004 | Drought Stress (root) | 11.367 |
| SRR2967015 | Control (root) | 9.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 92.638 |
| SRR9715740 | Leaf | 29.606 |
| SRR9715741 | Leaf | 71.343 |
| SRR9715739 | Root | 53.553 |
| SRR9715742 | Root | 129.870 |
| SRR9715743 | Root | 112.653 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.337 |
| SRR8749028 | MeJA induced 9h | 0.153 |
| SRR8749029 | MeJA induced 9h | 0.242 |
| SRR8749030 | Uninduced | 0.910 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.746 |
| SRR8400027 | Control - Root | 22.920 |