Gene detail information of Glyur000744s00021928 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G41310.1 | 5.00E-30 | response regulator 3 |
| NR | XP_003543102.1 | 7.70E-65 | PREDICTED: two-component response regulator ARR8-like [Glycine max] |
| COG | YP_436385.1 | 2.00E-08 | signal transduction histidine kinase [Hahella chejuensis KCTC 2396] |
| Swissprot | tr|O80365|ARR8_ARATH | 2.00E-39 | Two-component response regulator ARR8 |
| trEMBL | tr|I1LW92|I1LW92_SOYBN | 3.00E-65 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G03560.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00744 | 11350 | 15408 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Orphans |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000744s00021928.1 | PF00072.19 | Response_reg | 20 | 106 | 7.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.146 |
| SRR1783600 | control | 0.253 |
| SRR1783602 | moderate drought stress | 0.672 |
| SRR1811619 | moderate drought stress | 0.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.585 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.094 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.413 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.820 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.284 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.813 |
| SRR2868004 | Drought Stress (root) | 4.058 |
| SRR2967015 | Control (root) | 8.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.068 |
| SRR9715740 | Leaf | 1.621 |
| SRR9715741 | Leaf | 0.176 |
| SRR9715739 | Root | 0.776 |
| SRR9715742 | Root | 0.819 |
| SRR9715743 | Root | 0.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.904 |
| SRR8400027 | Control - Root | 22.155 |