Gene detail information of Glyur000743s00019298 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G25030.2 | 2.00E-96 | |
| NR | XP_004496323.1 | 0 | PREDICTED: uncharacterized protein LOC101505985 isoform X1 [Cicer arietinum] |
| trEMBL | tr|T2DN00|T2DN00_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:AGV54187.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00743 | 99324 | 106888 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000743s00019298.1 | PF11712.3 | Vma12 | 71 | 189 | 4.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.546 |
| SRR1783600 | control | 36.960 |
| SRR1783602 | moderate drought stress | 31.104 |
| SRR1811619 | moderate drought stress | 31.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.201 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.324 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.092 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.349 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.890 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.518 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 79.247 |
| SRR2868004 | Drought Stress (root) | 85.983 |
| SRR2967015 | Control (root) | 65.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 136.880 |
| SRR9715740 | Leaf | 83.420 |
| SRR9715741 | Leaf | 185.297 |
| SRR9715739 | Root | 63.055 |
| SRR9715742 | Root | 90.755 |
| SRR9715743 | Root | 84.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.306 |
| SRR8749028 | MeJA induced 9h | 56.437 |
| SRR8749029 | MeJA induced 9h | 62.749 |
| SRR8749030 | Uninduced | 104.304 |
| SRR8749031 | Uninduced | 70.144 |
| SRR8749032 | Uninduced | 103.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 85.293 |
| SRR8400027 | Control - Root | 86.321 |