Gene detail information of Glyur000743s00019288 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61560.1 | 2.00E-151 | Seven transmembrane MLO family protein |
| NR | AAX77015.1 | 0 | MLO1 [Lotus japonicus] |
| Swissprot | tr|Q94KB7|MLO6_ARATH | 0 | MLO-like protein 6 |
| trEMBL | tr|Q56BA4|Q56BA4_LOTJA | 0 | MLO-like protein {ECO:0000256|RuleBase:RU280816} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00743 | 40334 | 45733 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000743s00019288.1 | PF03094.10 | Mlo | 6 | 86 | 9.80E-32 |
| Glyur000743s00019288.1 | PF03094.10 | Mlo | 87 | 122 | 1.80E-10 |
| Glyur000743s00019288.1 | PF03094.10 | Mlo | 122 | 417 | 1.60E-130 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.185 |
| SRR1811619 | moderate drought stress | 0.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.113 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.112 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.167 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.064 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 27.213 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.537 |
| SRR2868004 | Drought Stress (root) | 0.557 |
| SRR2967015 | Control (root) | 0.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 38.769 |
| SRR9715740 | Leaf | 34.926 |
| SRR9715741 | Leaf | 44.433 |
| SRR9715739 | Root | 0.026 |
| SRR9715742 | Root | 0.433 |
| SRR9715743 | Root | 0.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.027 |
| SRR8749029 | MeJA induced 9h | 0.063 |
| SRR8749030 | Uninduced | 0.239 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.123 |
| SRR8400027 | Control - Root | 0.523 |