Gene detail

Gene detail information of Glyur000743s00019285

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G39190.2	0	Protein kinase superfamily protein
NR	XP_004496288.1	0	PREDICTED: uncharacterized protein sll0005-like [Cicer arietinum]
COG	YP_007128489.1	5.00E-95	ABC-1 domain-containing protein [Gloeocapsa sp. PCC 7428]
Swissprot	tr\|Q9MA15\|Y1796_ARATH	5.00E-80	Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic (Precursor)
trEMBL	tr\|I1NHF2\|I1NHF2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G31940.1}

Sequence

Transcript Sequence

>Glyur000743s00019285.1
CGAAACACAGAGAGGCTGAATGATAGAGTCGATGCATTGTTTTCTTTAACTTGGTTTTGTAAATTTTTCACACTTACTCTTAAAATGGAATTTATCAAACAAGTTTTTTTTCTCAATGTTTCACTGTTCAAAATAATTTTAAGAAAACAATAAAATAAAAAAGAGAATCTCATCTCATAATTCACACAGGCAGGTAGATTTTTGAGCAACGAGATAAGTGTGGATTCCACAGTTAAGTCCATGGCGTCGCTGATTTGTGATCAACATCATCGTATCGTATCGTAACTCTACCCCACAGCCACACATAACAACACACCACTCTCCCCTCCTANTCCTACCAATCCCTTCTCTCCTCACCACAATCACCACCACTTTCACATGTAACAACAAATGNGCATTCAATTCAACTTCAACACTGCCTTTTGAGCCCCAATCCAAACTTCTGTTTCCTCCCATGGCGACGGTGATAACACCGCCGCCACCACTCCTCTTCGTGCGTGCTGCAACGGTGTCATCGAGGAACACACGGGCACAGAGCAAAAGGAAGCAGCAGAAGCAGCATCGAGCAGTGGGCAATTTCGGACACTTTGCTGACGTGGTTCGCAAGGACATGGGGTTCATCAAGAGAGGAATTGACAAGGGAGTTGCGTGGGCCAACGATGCCTTTCGCATTCCCCAACTTGCTAAGAAGGTCGACGACCTTGTTTGGCTTCGCAATCTCGAAGACCCTCTTGCTGCTACTTCCTACTCTGCCCCTTCCTGGCCTCAGCCTTGGTACCCAGGACTGTCTGGAGTGGATTTGCTTATGTATGATCTCAAGGCCTTGGAAGCATATGCTAGTTACTTCTATGTTTCATCTAAGATTTGGTCAAAGCCACTCCCTGAAGCTTATGATCCNGAGGATGTTGCTCTCTATTTCAGTGTCAGGCCCCATGTGGTGGCACTTCGTATTCTTGAGGTATTTTCCTCCTTTGCCTCCGCTGTGATCAGTATTCGGGCTTCAGGGTTTAGAAAGTTTCTATGGCTAAATGGAGAANAGGATGTGGATGATAAAACTTCTGAATATAATTTTGGGACGGTGTTAAAGGAAACAATGCTTAATCTTGGCCCCACCTTTATAAAAGTTGGTCAGTCCCTTTCCACTAGGCCAGATATCATTGGTGTTGAGATGTCCAAGGCATTGTCAGAACTGCATGATCAAATCCCTCCTTTTCCCAGGACTGTTGCTATGAAGATTATTGAGGAAGAATTAGGATCTCCTCTGGAATCATTCTTCAGTTACATTTCTGAGGAACCTATAGCTGCTGCATCATTTGGTCAGGTTTACTTTGCCCGTACTACTGATGGTGTTAATGTTGCCTTAAAAGTTCAGCGTCCTAATTTGCATCATGTGGTGGTGCGAGATATCTACATTCTTCGCCTTGGGTTGGGGCTGCTGCGAAAGATTGCCAAGAGAAAAAGTGACCCNCGCCTATATGCTGATGAGCTTGGGAAAGGTTTTGTTGGTGAATTGGATTACACTTTAGAGGCTGCAAATGCTTCAAAGTTTCNGGAACTTCACTCTTCATTTTCTTTCATGCGAGTGCCAAAAGTATATCTACATTTAAGTCAGAAGAGAGTTCTGACCATGGAGTGGATGGTTGGTGAAAGTCCAACAGATTTGCTATCTGCATCTACCGGAAACTCTATTGGAGAGGTCTCTGAATATTCAGAAAGGCAGAAAGTAGATGCAAAAAGGCGTCTTCTTGATCTGGTCAATAAAGGTGTTGAAGCAACATTGGTGCAACTTCTTGAAACAGGCTTATTACATGCTGATCCACATCCTGGTAACTTGCGCTACACTTCATCAGGACAAATAGGGTTTCTGGATTTTGGCTTGCTCTGTCAAATGGAAAAAAGGCACCAGTTTGCTATGCTGGCTTCAATAGTTCATATAGTAAACGGTGACTGGGCATCCCTTGTCCGTGCTCTGACTGATATGGATGTTGTGAGGCCAGGGACAAATATCCGACTTGTTACCCTGGAACTGGAACAGGCCTTGGGAGAAGTTCTGGGAAAGATTTGGTCTGTAGCACTCAAGTATCATTTCCGTATGCCGCCATATTATACACTTGTCTTGCGATCCCTAGCTTCCTTGGAAGGTTTGGCTATAGCTGCAGATAGAAACTTCAAAACTTTTGAAGCTGCATATCCTTATGTTGTTCGGAAACTTCTAACAGAAAACTCAGCCGCAACAAGAAATATATTGCATTCGGTGCTTCTAAATCGAAAGAGGGAGTTCCAATGGCAAAGGCTTTCCCTGTTCTTGAGGATTGGGGCAACTAGGAAAGCCTTGCATCTAGTATCATCAAATAGTGAGACTTCCCTTAATCATTTACCAAATAAGGCCCCTGATGCATTTAATGTTGCGCACTTGATCTTGAGGCTTTTACCATCCAAAGATGGTGTCGCTCTACGAAGACTTCTCATGACTGCTGATGGAGCTTCATTAATCAAAGCAATGGTGTCGAAGGAGGGAAAGTTTTTCCGCCAACAACTTTGCAAGATCATAGCAGACGCGCTGTGCCAATGGATGATTAAATTATTTGGACAAGGAATTACGGCCACTCAGCATCCCGGGGTGATGTTGGTGAATGGACCTATCAACAAAGAATCAGGTCTATCGCCTACGTCATCCTTGCCTGCATATGATTACAGTTCCATCGTTAGAGATCGGCGACTCAGGGTGATATTCTCCAAGGTTCTAAAATCTGCAAGCAGTGATAAATTTTTGATGCTGCGCTTCTGCTGGGCTTCCCTTATCATAATGATTACAGCTTCAACTTTGGCTTGCCACCGGGCCANTCTGTCTCTGTCGGAAGCTTACTTGGGTCCGATATTCGATCCTCCCAAGAGATATGCAGTCAGTGCATGATATTTTCTTACAACATTCGGTTTTCCCTACTGAAAAAGAGAACATTCTTATCCAACATTTTTGGAAGAAAAAAAGAGAGAGAGGTTTATCTATATGGATAGCAAGAAACTGCTAACAAGCAATTGTGTTTGTAGCTTAAGTTGAATGTTTCTTTTTTCTTTCTATTAGCTGTGAAGCCAGCCAATTTAGTGTGAGGAAGGTGAAATATAGGTATAGGGTAACAATGTCTTTTAGTTACAGTTATGTTTTATATATGGGGAAACTCTGGTCTGTATGCTGTAAGCTGATGATGTTGCAGTCCAGATCTAGGTACCCTGCAAGTGTGTACAGTTTCATGTAAAGTGATACATTTATTTATTTATCTATTTTAGAATGAAGATAGATGTATTTGGTTACTGATCTTTGAATNAGTCCTATATAGATAGTTAAACTTTAGTTATTTCCGTTTGGTTACTAATATTCTCTGTATCAATCCTGAGGGGATAGTTACAGGCACATGCTTAATGTAATGATGTTAGGGGTGAGATGCTTCGGATGAGTTTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00743	23801	32736	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000743s00019285.1	PF03109.11	ABC1	264	381	2.10E-30
Glyur000743s00019285.1	PF01636.18	APH	428	489	8.00E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.098
SRR1783600	control	12.216
SRR1783602	moderate drought stress	12.873
SRR1811619	moderate drought stress	12.783

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.308
DRR006520	Root Summer glycyrrhizin high producing strain	13.318
DRR006521	Root Winter glycyrrhizin high producing strain	13.232
DRR006522	Root Winter glycyrrhizin high producing strain	12.708
DRR006523	Root Summer glycyrrhizin low producing strain	13.715
DRR006524	Root Summer glycyrrhizin low producing strain	14.003
DRR006525	Leaf Summer glycyrrhizin high producing strain	34.298
DRR006526	Leaf Summer glycyrrhizin high producing strain	34.101

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.109
SRR2868004	Drought Stress (root)	17.059
SRR2967015	Control (root)	18.830

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	44.805
SRR9715740	Leaf	52.887
SRR9715741	Leaf	48.549
SRR9715739	Root	11.204
SRR9715742	Root	16.948
SRR9715743	Root	15.137

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	7.095
SRR8749028	MeJA induced 9h	10.285
SRR8749029	MeJA induced 9h	3.853
SRR8749030	Uninduced	3.552
SRR8749031	Uninduced	2.266
SRR8749032	Uninduced	3.294

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	20.194
SRR8400027	Control - Root	20.687