Gene detail information of Glyur000742s00025079 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23160.1 | 4.00E-19 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 |
| NR | KEH43937.1 | 8.07E-103 | cysteine-rich receptor-kinase-like protein [Medicago truncatula] |
| Swissprot | tr|Q9M0X5|CRK25_ARATH | 2.00E-21 | Cysteine-rich receptor-like protein kinase 25 (Precursor) |
| trEMBL | tr|A0A072VQ80|A0A072VQ80_MEDTR | 3.00E-103 | Cysteine-rich receptor-kinase-like protein {ECO:0000313|EMBL:KEH43937.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00742 | 111941 | 112936 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000742s00025079.1 | PF01657.12 | Stress-antifung | 38 | 139 | 1.20E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.331 |
| SRR1783600 | control | 1.614 |
| SRR1783602 | moderate drought stress | 1.113 |
| SRR1811619 | moderate drought stress | 1.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.798 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.708 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.089 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.087 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.586 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.097 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.074 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.513 |
| SRR2868004 | Drought Stress (root) | 6.171 |
| SRR2967015 | Control (root) | 5.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.051 |
| SRR9715740 | Leaf | 0.025 |
| SRR9715741 | Leaf | 0.224 |
| SRR9715739 | Root | 0.060 |
| SRR9715742 | Root | 0.468 |
| SRR9715743 | Root | 0.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.786 |
| SRR8749028 | MeJA induced 9h | 0.461 |
| SRR8749029 | MeJA induced 9h | 0.488 |
| SRR8749030 | Uninduced | 0.775 |
| SRR8749031 | Uninduced | 0.116 |
| SRR8749032 | Uninduced | 0.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.371 |
| SRR8400027 | Control - Root | 1.751 |