Gene detail

Gene detail information of Glyur000742s00025062

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G61790.1	3.00E-114	Oligosaccharyltransferase complex/magnesium transporter family protein
NR	XP_004496772.1	0	PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B-like [Cicer arietinum]
Swissprot	tr\|Q9SYB5\|OST3B_ARATH	8.00E-150	Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B (Precursor)
trEMBL	tr\|I1LE85\|I1LE85_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G39750.1}

Sequence

Transcript Sequence

>Glyur000742s00025062.1
ATGGCTCCCTCTCTCAACCTGGCATTATGGATTCTGATCGCCGTCGTCTCATCCGCGATGGCCTCCTCGGAATCAAACGAGGAACGAGTGAGCGAGCTTCTATCCCTGGAATCGAGATCCAAATCTGGCATAATCCGCCTCAACGACCAATCCATCGCCCGCTACATTACCTCCGTCGAAACCCCGAGACCCTACTCCATCCTCATCTTCTTCGACGCCGCCCAGCTCCACGACAAGGCTGAGCTCCGCCTCACNGACCTCCGCAACGAGTTCTCCATCGTCGCCTCCTCCTTCATCACCAACAACGCCAACCACTCCTCCTCCCTCTCCAAGCTCTTCTTCTGCGACCTAGAATTCAAGGAGTCTCAGCTCAGCTTCTCACAGTTCGGCGTCAACGCCCTCCCCCACATACGCCTCGTGGGCCCCAATATGGGCCTCAAGGACTCCGAGCCCATGGACCAGGGCGATTTCTCCAGACTNGCCGATTCCATGGCCGAGTTCGTCGAGGCCAAAACCAGGCTCTCCGTGGGACCCATCCACCGACCCCCGCTCCTCTCCACCAATAGGATCATCCTCATCGTACTCGCGGCCCTTGTTTGGCTATCATTCTTCGTGAAGAAGCTCCTCGCCGGTGAGACCCTTCTCCATGACCCTAGGGTTTGGTTGGCGGGTTCCGTTTTCGTCTACTTCTTCAGCGTTTCCGGCGCAATGCACAACATCATAAGGAAGATGCCCATGTTTCTCGTGGACCGCAATGATCCTTCTAAGCTCGTGTTTTTCTACCAGGGATCTGGGATGCAGCTTGGTGCTGAGGGTTTCACTGTGGGGTTCCTGTACACACTTGTTGGGTTGCTCTTGGCGTTCATGACCCACGGTCTCGTTAAGATCAGGAGTGTGACCGTGCAGAGGGTGATTATGATTTTTGCGCTATTGGTTTGTTTTCTGGCTGTGAAGCAGGTTGTCTATTTGGATAATTGGAAGACNGGTTATGGGATTCATGGGTTTTGGCCCTCTAGCTGGAACTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00742	32073	33098	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000742s00025062.1	PF04756.8	OST3_OST6	164	316	1.60E-34

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	155.746
SRR1783600	control	156.774
SRR1783602	moderate drought stress	135.747
SRR1811619	moderate drought stress	123.124

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	103.076
DRR006520	Root Summer glycyrrhizin high producing strain	102.485
DRR006521	Root Winter glycyrrhizin high producing strain	48.326
DRR006522	Root Winter glycyrrhizin high producing strain	48.426
DRR006523	Root Summer glycyrrhizin low producing strain	79.002
DRR006524	Root Summer glycyrrhizin low producing strain	80.928
DRR006525	Leaf Summer glycyrrhizin high producing strain	40.649
DRR006526	Leaf Summer glycyrrhizin high producing strain	38.526

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	75.182
SRR2868004	Drought Stress (root)	51.241
SRR2967015	Control (root)	59.459

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	37.762
SRR9715740	Leaf	37.460
SRR9715741	Leaf	45.828
SRR9715739	Root	129.260
SRR9715742	Root	86.683
SRR9715743	Root	93.766

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	42.597
SRR8749028	MeJA induced 9h	49.791
SRR8749029	MeJA induced 9h	26.879
SRR8749030	Uninduced	20.375
SRR8749031	Uninduced	11.524
SRR8749032	Uninduced	8.528

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	58.992
SRR8400027	Control - Root	58.943