Gene detail

Gene detail information of Glyur000740s00028695

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G23360.1	5.00E-82	Plant protein of unknown function (DUF869)
NR	XP_003528519.1	0	PREDICTED: filament-like plant protein 7-like isoform X1 [Glycine max]
Swissprot	tr\|Q9SLN1\|FPP7_ARATH	4.00E-87	Filament-like plant protein 7
trEMBL	tr\|K7L327\|K7L327_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G33810.2}

Sequence

Transcript Sequence

>Glyur000740s00028695.1
ATGATTAAAGAAGTACCTGAAATCATGAATCACAAGCCATGGCTTTGGAGGAAAAGATCTATGGAGAAGACACTCTTTACAATGGACAAAGTTGTCAGTCCTTCTAGAACCAATGAAAAAGAGGCAGACAAACTTTCAATAGATAAGGAAAGTGGATTGGAAAGATCATCAAAAAGTCTAAACGAGAAGTTGGCAACAGTCCTCCTTGGTTCTCCTGTTGAAGATGACCCTTTACCAAAACATGCCCAAAGTTCCCANCAGGCAATTAGAGGCAACGATGAGGCAAAAGAAGGAGTAGAATCTNCTGAAGATTTAGATAAAAAAGCTTCTGCTGAAACTGTTACTCCTACAGATGCAACATTGCGGNAACCTTTGCAGCCAGAAAGCTGTGTTCAAGAAGAACAAGAGCAAAGGGTGTGTNTTGCCATTCCAAAGGTGTCAGAAGAGCATGAGAAGATTCAGAAAGAATTGNAGGAGAAGCTGAGAGAAACAAGTAAAAGGATAGATGACTTAACTGCTGAGAATACTCGTCTAGCTAATGCCTTACTCTCCAAAGAGGAATTTATTGGGGACATGCTTAGATGTAAACAAGAAGCAGATGCAGAGTTTAGTACACTGATGGCCAGGTTAGATTCCACTGAAAAGGAAAATGCATTCCTAAGATATGAGTTTCACATGCTGGAGAAGGAACTTGAGATACGGAAGGAGGAGATGGACTATAGCCGTCAGTGTGCAGATGTATCACATAAACAGTNTCTTGAGAGTTCTCAGAAAGCCTCAAAGTTAGAAGCCGAGTGTCAGAGACTCCGCCTCCTGCTGCGAAAAAGGTCTCCTGGTCTTGCTGGTTCAGTGAGTATGAAGAATGAAACTGGAATGATGAGAAAAGAGGCAACAGATATGAGAAGAAAGTCAAATCCTACCAGGGATTTGATTTGTAAAAATAATGGTATTGGAAACTCTACTGAAGTATCTGAGAAGAGTATCGGCTTGATGATCAAACGTTTACAAGACCTGGATGAGGAGAACAAGGCTNTCAAAAGAATATTAACAAAGAAAAACTCTGAACTAGATTCTTCAAGAATTATGTATGCTGAAACAGCTTCCAGGTTATCACAGGCTGAGATTCTGCTTAGAAAGGTTTCTGAAAATCAAAAGTCCATGGAGCTAGCAAGGTGTTATCCAACATCAAATGAACTTCCTTTGACATCAAAATTTGACATTTCTAGTGATGATGAGGCTCTCTCTTCTGGATCCTGGGCAACTGCTCTTATGTCAGAACTTGAACATCTAAGAATTGCAGAGGCTAAAATTCATACGAACGATAAATCCGTAAAAGTTCCAGACTTTCNTTACATGGATGATTTTGTTGAGATGGAGAAACGAGCTATAGTTTCTGTTGATACACCTAAAAGTGGATACTGCTCTGAAATAAGTGGGCGGGAGCTAGTGCCAGTTGAACACGATTTTGGCCTTNGTGAGAGGAAACAGGAAATCCAATTCAAACAAACAGCAACTCAAAAACCATTTGACTGGCTTCAGATTGTTTTGAATGCCATCTTGGAGGAGAAACACATATCAAAACGAAGTCTTGATGAATTGTTTGATGACATAAAAATTGCTTTGGGTTTCATAAATCACTCAGCTGCTTGTAAATCTGANACAATTCAGAAGTCAATGCATCCTGGAGAATATGATTCTTTTCATGTTAATAGTTGTAGTGGTTTTACAGAAGCAAAAGGCAACCAACACTTCAATTCTAATTTGACAAAGACAGTCCATAGAATTATCAAGCTCATTGAAGGAATTGCTCCCAAGTCATTTATGTGCAACAATTCTCCAGATTGCTTGGAGGAGAACCAGCAATCAGACTTATCTCAATCNCCTAAATCCAAAGAATACTTTGTTCATGTTTTCCAATGGAAGGTTTCGGACTTGAATCCTCTTCTGCATCAACTTGTTCACNCCTGCAAAAATTTATTAACAGGGAGGGCTGATTTTGAAAATTTTATTGAGGAAGTGGCATTTGCTTTGGACTGGAGCATTAATAACTGTGCCAACTCCACAAATGCTTCAATTGCAAGGGATAAGATCAAGAAGCATTTTAACTGTCATCTGTCAAAAAATGAAAACGAGAATGAAAATNAAATAGCTGTTGATGATAAACAGTCTTTCCTCTCCCCTTCAGTTGCATATCCAGATGATCAGTCCGAGTTATTCAAAAAAAAGGATAGTCAGTATGATCTCCTTGAAGAAATTGGAAAATTAAAAGATGAACTGAGGAACACACAATCTGCGAAGAAAGACTTGGAAGCAAAGCTGTTGTCAGTAACCGACGAGAGTCAGAACTTGACAAAACAATGTCAAGAAGCACAAAATAGCATCAAAGGTTTAGAATCAGAAATAGAGAAACTGAAAGAATCCAAATCCACAGTTGAAGAGCAGGTTGAAAAACAAAAGATGATAAATGAAGATCTTGACACTCAACTTACAATAGCCCAGGCCAAGTTAAATGGCATCTTTCAAAGGTTTTCATCCTTGGAATTTGAATTAGAGGATAAAAAGAACTCGTGTGAGGAATTAGAAGCAACATGTCTTGAGCTTCAACTCCAGCTGGAAAGCATCGCAAAGAAGGAATCTCCAACACATGGCAGATACGAAGTGGAAAAGATATATCAAACTGGCTGGGAGATCACTACAGCTTCATCAAAGTTAGCAGAGTGCCAAGAAACTATTCTCAACCTTGGGAAACAACTCAAGGCACTTGCTTCATCTAGTGAAGCAACACTTCTTGATAGGGTTGTCTCCACAACTAGCACTATGGCCAATCCAGCCCAGAAGAAGAACTTGATCAAAAGATCCTCACTACGCAATCAAATGCAAGCTGAGGATGATGCTAAAGACGGGATCCATAAGTCTGTCCAAACTGAAGAAAGTAAAAGTATCAAAACTGCACAGGGNCCACTCCTTCAATCTGGAAAAGAAAGTGCTTTGCAAACTCCTCATATCATGGTTAATGCTCCAGAAACAAGTCTCACTAAAGAGCAAAATGATAGAAGCAATGCCACAGGATCTCTGACACTTGTACCGAGTAAAAAACCAGGAGGCTTTGATTTTCTGAGGAAGCTGCTGTTAAGACGAAAGAAAGGGAGGAGTAAAGGAACCAAGTCATTAGCCAAAGCATGACCAAGAATGGTCTTGCAGATAAGGTTAAGNTCAGCAGCTTCTGCTATCCGTTTTAGCATGTGTGGATTTTGGTGTAGCACACTTTTTATCTTTTATTGGTTGGCAATGGCTTCTTTGATTGGAGGTGATTGAGGTTCGTAGTTGAGGCCCATAAAATGAGAGGTTTGCTGTTGTAGATATTGGTGTACATATATACATTGCTTTATTGCAGTTTGACATTATACTTTCTGATATTTATGGAGTGAGTTTGGCTTGCATTAGTGTTTCCCATCTTACAGAGAAAATAAATTATCCACATTATCACTTCCTTATATTATATCTGCGATGTATATATGGATTTAGCTCCTCGAAATCCTATATGTATATTCTGCCAAGCTATACTACATGACATGCCAA

Protein Sequence

>Glyur000740s00028695.1
MIKEVPEIMNHKPWLWRKRSMEKTLFTMDKVVSPSRTNEKEADKLSIDKESGLERSSKSLNEKLATVLLGSPVEDDPLPKHAQSSXQAIRGNDEAKEGVESXEDLDKKASAETVTPTDATLRXPLQPESCVQEEQEQRVCXAIPKVSEEHEKIQKELXEKLRETSKRIDDLTAENTRLANALLSKEEFIGDMLRCKQEADAEFSTLMARLDSTEKENAFLRYEFHMLEKELEIRKEEMDYSRQCADVSHKQXLESSQKASKLEAECQRLRLLLRKRSPGLAGSVSMKNETGMMRKEATDMRRKSNPTRDLICKNNGIGNSTEVSEKSIGLMIKRLQDLDEENKAXKRILTKKNSELDSSRIMYAETASRLSQAEILLRKVSENQKSMELARCYPTSNELPLTSKFDISSDDEALSSGSWATALMSELEHLRIAEAKIHTNDKSVKVPDFXYMDDFVEMEKRAIVSVDTPKSGYCSEISGRELVPVEHDFGLXERKQEIQFKQTATQKPFDWLQIVLNAILEEKHISKRSLDELFDDIKIALGFINHSAACKSXTIQKSMHPGEYDSFHVNSCSGFTEAKGNQHFNSNLTKTVHRIIKLIEGIAPKSFMCNNSPDCLEENQQSDLSQSPKSKEYFVHVFQWKVSDLNPLLHQLVHXCKNLLTGRADFENFIEEVAFALDWSINNCANSTNASIARDKIKKHFNCHLSKNENENENXIAVDDKQSFLSPSVAYPDDQSELFKKKDSQYDLLEEIGKLKDELRNTQSAKKDLEAKLLSVTDESQNLTKQCQEAQNSIKGLESEIEKLKESKSTVEEQVEKQKMINEDLDTQLTIAQAKLNGIFQRFSSLEFELEDKKNSCEELEATCLELQLQLESIAKKESPTHGRYEVEKIYQTGWEITTASSKLAECQETILNLGKQLKALASSSEATLLDRVVSTTSTMANPAQKKNLIKRSSLRNQMQAEDDAKDGIHKSVQTEESKSIKTAQGPLLQSGKESALQTPHIMVNAPETSLTKEQNDRSNATGSLTLVPSKKPGGFDFLRKLLLRRKKGRSKGTKSLAKA

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00740	55024	60808	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000740s00028695.1	PF05911.6	DUF869	112	929	3.60E-126

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.729
SRR1783600	control	10.791
SRR1783602	moderate drought stress	13.602
SRR1811619	moderate drought stress	13.386

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.553
DRR006520	Root Summer glycyrrhizin high producing strain	8.515
DRR006521	Root Winter glycyrrhizin high producing strain	0.187
DRR006522	Root Winter glycyrrhizin high producing strain	0.193
DRR006523	Root Summer glycyrrhizin low producing strain	5.459
DRR006524	Root Summer glycyrrhizin low producing strain	5.421
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.869
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.871

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.741
SRR2868004	Drought Stress (root)	11.427
SRR2967015	Control (root)	18.460

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.417
SRR9715740	Leaf	0.601
SRR9715741	Leaf	0.998
SRR9715739	Root	1.053
SRR9715742	Root	4.592
SRR9715743	Root	4.271

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.655
SRR8749028	MeJA induced 9h	1.845
SRR8749029	MeJA induced 9h	1.544
SRR8749030	Uninduced	0.743
SRR8749031	Uninduced	0.648
SRR8749032	Uninduced	0.609

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.209
SRR8400027	Control - Root	18.512