Gene detail information of Glyur000740s00028687 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49740.1 | 9.00E-157 | PLC-like phosphodiesterases superfamily protein |
| NR | XP_006574889.1 | 0 | PREDICTED: PI-PLC X domain-containing protein At5g67130 [Glycine max] |
| COG | YP_001869900.1 | 4.00E-24 | glycoside hydrolase family protein [Nostoc punctiforme PCC 73102] |
| Swissprot | tr|Q93XX5|Y5713_ARATH | 6.00E-139 | PI-PLC X domain-containing protein At5g67130 (Precursor) |
| trEMBL | tr|I1JE01|I1JE01_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G11450.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00740 | 1063 | 5328 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.899 |
| SRR1783600 | control | 0.823 |
| SRR1783602 | moderate drought stress | 0.953 |
| SRR1811619 | moderate drought stress | 0.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.545 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.473 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.049 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.053 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.848 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.646 |
| SRR2868004 | Drought Stress (root) | 6.440 |
| SRR2967015 | Control (root) | 6.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.556 |
| SRR9715740 | Leaf | 2.205 |
| SRR9715741 | Leaf | 2.440 |
| SRR9715739 | Root | 0.318 |
| SRR9715742 | Root | 2.151 |
| SRR9715743 | Root | 2.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.133 |
| SRR8749028 | MeJA induced 9h | 0.359 |
| SRR8749029 | MeJA induced 9h | 0.340 |
| SRR8749030 | Uninduced | 0.987 |
| SRR8749031 | Uninduced | 0.620 |
| SRR8749032 | Uninduced | 0.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.462 |
| SRR8400027 | Control - Root | 5.788 |