Gene detail

Gene detail information of Glyur000738s00028799.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G42640.1	H(+)-ATPase 8
NR	XP_004488894.1	PREDICTED: ATPase 8, plasma membrane-type-like [Cicer arietinum]
COG	YP_005270382.1	plasma-membrane proton-efflux P-type ATPase [Acetobacterium woodii DSM 1030]
Swissprot	tr\|Q9M2A0\|PMA8_ARATH	ATPase 8, plasma membrane-type
trEMBL	tr\|I1LZM3\|I1LZM3_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G22370.1}

Sequence

Transcript Sequence

>Glyur000738s00028799.1
ATGTTATTGAGTTCTCCCTTAGTAGCACAGTTGGTAGATATATCGAGAGGACACTTGAGGGATCTCAAGAATGAGAATGTTGATCTTGAAAACATTCCAGTTGAAGAGGTCTTTCAGCAGTTGAAATGTACCAGAGAGGGTCTCACATCCGAGGAAGGAGAGAAGAGGCTCCAAGTTTTTGGCCCCAACAAACTAGAGGAGAAAAAAGAATGCAAGGTCCTCAAGTTCTTGGGTTTTATGTGGAATCCATTGTCATGGGTTATGGAGGCAGCTGCTGTCATGGCCATTGTATTGGCCAATGGAGGGGGCAAGCCACCAGATTGGCAAGATTTCACTGGTATTGTGGTGTTGCTTATCATTAACTCAACCATCAGTTTCATTGAGGAAAACAATGCAGGCAATGCTGCAGCTGCTTTGATGGCTGGTCTTGCACCCAAAACCAAGGTGTTGAGGGATGGAAAATGGACTGAGCAAGATGCAGCAATTTTGGTACCAGGAGATTTAATTAGCATCAAATTGGGAGACATTGTCCCTGCTGATGCACGTCTCTTGGAGGGAGATCCCCTCAAGATTGACCAATCTGCCCTCACTGGCGAGTCCTTGCCGGTCACAAGGAACCCTGGTGATGAAGTCTTCTCTGGATCCACCTGCAAACAAGGTGAGATTGAGGCAGTTGTCATCGCCACTGGTGTCCACACCTTCTTTGGCAAGGCTGCACACCTTGTGGACAGCACCAACAATGTTGGTCACTTCCAACAGGTGTTGACATCCATTGGTAACTTCTGTATTTGCTCAATTGCTTTGGGCATGTTGGTTGAGATCATTGTCATGTATCCCATCCAGCATAGGGCTTACAGAGAAGGTATTGACAATTTGTTGGTGCTTCTCATTGGCGGCATCCCAATTGCCATGCCAACTGTCTTGTCTGTGACCATGGCTATTGGATCTCACCGCTTGTCTCAACAAGGAGCCATCACCAAGAGGATGACAGCCATTGAAGAAATGGCAGGGATGGATGTTCTCTGCAGTGACAAGACTGGAACTCTAACACTCAACAAGCTTACTGTGGACAAGAACATGATTGAGGTGTTCCCCACTGGTATTGACAAGGACACTGTTGTGTTATTTTCCGCTAGAGCTTCTAGGACTGAAAACCAGGATGCCATTGATGCATCAATTGTGAATATGTTGAGCGATCCCAAGGAGGCTAGAGCAGGAATCACTGAGGTGCATTTCTTGCCTTTCAATCCTGTGGATAAGCGTACTGCTATTACCTATATTGACAACAATGGGAACTGGCACAGAAGCAGTAAAGGTGCTCCTGAGCAAGGAGAGACTTTGAAAAAGGCCCACAAAATCATTGATGAGTTTGCTGATCGTGGCTTGCGTTCTTTAGCTGTTGCTCGCCAGACTGTTTCGGCTAAGAATAAGGAGAGTACAGGAGAACCATGGGAGTTCTTAGGTCTCTTACCACTCTTTGACCCTCCAAGGCATGATAGTGCTGAGACTATTCGTCGTGCTCTTGACCTTGAAACCGGTCGCAGGCTTGGAATGGGCACCAACATGTACCCTTCATCCTCCCTTCTTGGCCAAAGCATGGATGCTACCACTGCATCGATCCCAATTGACGAACTCATTGAGAAGGCTGACGGATTCGCTGGAGTCGGCTTTGGAAATATGCTTCAACACATAGCTAATGAAATAACCTTTGGCATGTGCCATGCAGAGCACAAGTATGAGATTGTGAAGAGGTTACAGGACAAAAAACACATTTGCGGAATGACTGGAGATGGTGTGAACGATGCACCAGCACTGAAGAAGGCAGACATTGGCATTGCAGTGGCCGATGCAACTGATGCTGCAAGGAGTGCCTCAGACATTGTCTTGACTGAGCCTGGGCTTAGTGTGATTGTGAGTGCCGTGTTGACAAGCAGGGCCATCTTCCAGAGGATGAAGAACTACACCATCTATGCTTTTGACTTCTCCCCTTTCATGGTCCTCATCATTGCCATCTTGAACGACGGAACCATTATGACCATCTCCAAGGACAGGGTAAAGCCATCTCCTGTACCTGACTCATGGAAGCTCAATGAAATCTTCGCCACTGGAGTCGTTCTTGGAACCTATATGGCCATCATGACCGCAATTTTCTTCTATGTCATTCATGACACTGATTTATTCTCTAGAACTTTCGGTGTCCACCCAATTGCAGACAGTGAGGAGCATCTTAACTCAGCTCTCTACCTTCAAGGTCAAGGAGCTGGTCATATGTGGGAACGCCCTGGTACGATGCTTCTTGGAGCTTTCATTGCTGCACAGCTGGTGGCCACTGTCATTGCTGTGTACGCACACTGGGACTTCGCTAGAATCAATGGAGTTGGGTGGAGATGGGCAGGAGTCATTTGGATCTATAGCATTATTACCTACATCCCTCTTGACATCCTCAAGTTTTTAATTCGCATGGGTCTCACAGGCAGTTGTTGGGACAACATGCTCCAAAACAAGGCTCAATGGGCTGTGGCTCAACGCACAATGCATGGTCTTCAAGCCCCTGAGGCCCAAAAGAACAACCACCATGAGCATTCTGAAATGGCTGAGCAGGCGAAGAGACGTGCTGAGGCAGCTAGGCTGAGGGAGCTACACACACTCAAGGGACACGTTGAGTCGGTAGTTAAGTTGAAGGGTCTTGACATCGATACCATCCAACAACACTACACAGTATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00738	12747	19102	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01535	PMA1, PMA2	EC:3.6.3.6	Oxidative phosphorylation	map00190

Gene Ontology

biological_process
GO:0006754 ATP biosynthetic process

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0000166 nucleotide binding

GO:0016887 ATPase activity

GO:0046872 metal ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000738s00028799.1	PF00690.21	Cation_ATPase_N	31	94	2.40E-13
Glyur000738s00028799.1	PF00122.15	E1-E2_ATPase	113	334	5.90E-58
Glyur000738s00028799.1	PF00702.21	Hydrolase	338	609	1.30E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.000
SRR2868004	Drought Stress (root)	0.000
SRR2967015	Control (root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.000
SRR9715740	Leaf	0.009
SRR9715741	Leaf	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.000
SRR8400027	Control - Root	0.000