Gene detail information of Glyur000735s00021566.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10000.1 | 1.00E-13 | Homeodomain-like superfamily protein |
| NR | KEH43422.1 | 1.78E-59 | trihelix transcription factor [Medicago truncatula] |
| Swissprot | tr|Q9LZS0|PTL_ARATH | 7.00E-13 | Trihelix transcription factor PTL |
| trEMBL | tr|A0A072VNQ7|A0A072VNQ7_MEDTR | 7.00E-60 | Trihelix transcription factor {ECO:0000313|EMBL:KEH43422.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00735 | 1118 | 1597 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Trihelix |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.947 |
| SRR1783600 | control | 17.367 |
| SRR1783602 | moderate drought stress | 25.893 |
| SRR1811619 | moderate drought stress | 26.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.432 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.117 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.415 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.904 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.265 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.007 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.052 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.044 |
| SRR2868004 | Drought Stress (root) | 0.102 |
| SRR2967015 | Control (root) | 0.149 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.170 |
| SRR9715740 | Leaf | 0.195 |
| SRR9715741 | Leaf | 0.463 |
| SRR9715739 | Root | 0.278 |
| SRR9715742 | Root | 1.722 |
| SRR9715743 | Root | 0.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.720 |
| SRR8749028 | MeJA induced 9h | 1.467 |
| SRR8749029 | MeJA induced 9h | 0.633 |
| SRR8749030 | Uninduced | 0.153 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.372 |
| SRR8400027 | Control - Root | 4.038 |