Gene detail information of Glyur000731s00024671 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28060.1 | 5.00E-36 | 5'-AMP-activated protein kinase beta-2 subunit protein |
| NR | XP_006592275.1 | 2.27E-63 | PREDICTED: SNF1-related protein kinase regulatory subunit beta-3-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9ZUU8|KINB3_ARATH | 4.00E-45 | SNF1-related protein kinase regulatory subunit beta-3 |
| trEMBL | tr|I1LR63|I1LR63_SOYBN | 8.00E-64 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G08370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00731 | 8335 | 10972 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000731s00024671.1 | PF04739.10 | AMPKBI | 42 | 121 | 2.40E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.385 |
| SRR1783600 | control | 14.263 |
| SRR1783602 | moderate drought stress | 15.517 |
| SRR1811619 | moderate drought stress | 15.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.341 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.277 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.553 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.250 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.835 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.908 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.191 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.001 |
| SRR2868004 | Drought Stress (root) | 31.056 |
| SRR2967015 | Control (root) | 31.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.024 |
| SRR9715740 | Leaf | 24.150 |
| SRR9715741 | Leaf | 22.638 |
| SRR9715739 | Root | 3.945 |
| SRR9715742 | Root | 12.239 |
| SRR9715743 | Root | 11.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.810 |
| SRR8749028 | MeJA induced 9h | 58.977 |
| SRR8749029 | MeJA induced 9h | 50.457 |
| SRR8749030 | Uninduced | 45.148 |
| SRR8749031 | Uninduced | 26.903 |
| SRR8749032 | Uninduced | 25.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.181 |
| SRR8400027 | Control - Root | 26.952 |