Gene detail information of Glyur000729s00041397 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11780.1 | 9.00E-56 | MD-2-related lipid recognition domain-containing protein / ML domain-containing protein |
| NR | AFK39278.1 | 2.03E-89 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SG86|I3SG86_LOTJA | 8.00E-90 | Uncharacterized protein {ECO:0000313|EMBL:AFK39278.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00729 | 112781 | 117667 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000729s00041397.1 | PF02221.10 | E1_DerP2_DerF2 | 27 | 146 | 8.40E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 50.797 |
| SRR1783600 | control | 51.408 |
| SRR1783602 | moderate drought stress | 42.722 |
| SRR1811619 | moderate drought stress | 42.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.553 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 44.110 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 48.478 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.012 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.487 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.513 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.934 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 71.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.889 |
| SRR2868004 | Drought Stress (root) | 23.551 |
| SRR2967015 | Control (root) | 27.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.879 |
| SRR9715740 | Leaf | 44.575 |
| SRR9715741 | Leaf | 31.491 |
| SRR9715739 | Root | 5.191 |
| SRR9715742 | Root | 18.079 |
| SRR9715743 | Root | 16.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.021 |
| SRR8749028 | MeJA induced 9h | 14.855 |
| SRR8749029 | MeJA induced 9h | 12.824 |
| SRR8749030 | Uninduced | 27.036 |
| SRR8749031 | Uninduced | 12.063 |
| SRR8749032 | Uninduced | 22.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.097 |
| SRR8400027 | Control - Root | 44.543 |