Gene detail

Gene detail information of Glyur000729s00041395

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G11760.1
NR	XP_004497638.1	PREDICTED: uncharacterized protein LOC101499059 [Cicer arietinum]
trEMBL	tr\|G7I7Z4\|G7I7Z4_MEDTR	EEIG1/EHBP1 protein amino-terminal domain protein {ECO:0000313\|EMBL:AES60550.1}

Sequence

Transcript Sequence

>Glyur000729s00041395.1
AAAATGGCGTTANTATAAAAGAGCATCCGAATCCTTTTGAAGATCCACAGACTAAAATTTCTTTCCTCTCTTTTCCCATTCACCCCTTCTTCTTCTCTTCTCNGCTTTCTCTTTTGTCTCTCCTTCAACCACCGACCAAACTTTAACAACATTAACCACATCGACAACAACAAGAAAAAGAAGAAACACTATGGTGGTGAAGATGATGAAGTGGAGGCCGTGGCCGCCTCCGATGTCGAGAAAGTACGAGGTGAAGCTTGTGGTGAGGAGTCTCCAGGGCTTCGATCTGCTACATGAGGGTCCACAGAAAGGANGTGGATTCGCTGTTGAGATTAGGTGGAAGGGTCCCAAACTCGCCCTAAGCTCCCTCCGCCGCAACGCCATCGCTAGAAACTTCACCAGGGAGGTCCGCGGAGAAAACGACGTCGTTTTGTGGGACGAGGAGTTTCAGAGCTTCTGCAACCTCTCTGCAAACAAGGAGAATGCCTTTCACCCTTGGGAGATCGCTTTCACTGTCTTCAATGGTTTCAATCAAAAGCCAAAGAACAAGGTTCCTGTGGTTGGAACGGCTTCATTGAATCTAGCTGAGTTTGCATCTGCAGTTGATCAGAAAGGTTTTGATTTGAGCATTCCACTCACACTTCCTGGGGGTTCTTCTTCTTCTTCTGTTGACCCTTCTCCTTCACTCACTATATCAATTGGCTTAGTTGAGCTTAGAGTGGCTCAAGAGAGTATGGAGCTTGTCCATAAACCAATACTAGTGACTGTTCCATCATCCCTGGCCCAGTCAGGAGGAGAGACTAACTTGGCAGAAAAGGATGAGCTTTCCACCATCAAAGCTGGTCTTANGAAAGTGAAGATTTTGACAGAGTTTGTGTCGGCCAGGAAGGCAAGGAAAGCGTGCCGCGANGAAGAGGGAAGTGAAGGCAATTTCTCAGCCAGGAGTGAGGATGGNGGTGAGTGCAATTACCCTTTTGACTCTGATTCCCTTGATGATTTTGAGGAAGGAGGGGATTCGGTTTCGGATGAGGTGAAGGAGGATTCCTCCAGTGTTAGGAAGTCATTCAGTTATGGGAAACTGGCCTATGCAAATGCTGGGGGAGCATTCTATTCCGGGACGAGGGCAAGTAGTGATGATGAGGACTGGGTTTACTACAGCAATCACAAATCAGATGTTGGGAGTTTGCAGGTAGAGGATTCAACTGTTTCCTCCTCTGAGCCTTATCTATTGCAGACTTCGAGGCGCAGCATATTGCCTTGGAGGAAGAGGAAGTTGAGTTTCAGATCTCCTAAATCTAAGGGAGAGCCGTTGTTAAAGAAGGCCTACGGAGAAGAAGGTGGTGATGACATTGATTTTGATCGCCGACAGCTTAGCTCTGATGAATCCCTTTCACTTGGGTCACAGAAGACTGAGGACGATTCATGTGCAAATCGAACGTCGGTATCTGAATTTGGGGATGACAATTTTGCNGTTGGGAGTTGGGAGCAGAAGGAAGTAATGAGCCGTGACGGACACATGAAACTCCAGACACAAGTTTTCTTTGCCTCAATNGATCAGCGGAGTGAACGTGCAGCAGGTGAGAGTGCGTGTACAGCCCTGGTTGCTGTAATTGCTGACTGGTTCCAAAACAATCACGATCTCATGCCCATAAAGTCCCAGTTCGATAGTTTAATTCGAGAAGGCTCATTAGAATGGAGGAACCTATGTGAAAACCAGACATACAGGGAACGGTTCCCCGACAAGCATTTCGATCTCGAAACAGTCATTCAGGCCAAAATACGCCCCCTTTCTGTGGTTCCTGGGAAGTCCTTTATCGGTTTTTTCCATCCAGAAGGAATGGACGAGGGGAGATTCGATTTTCTGCATGGGGCCATGTCTTTTGACAACATTTGGGATGAGATTAGTCATGCTGGAGAGGAGTGCACTAATAATAATGGTGAACCCCGCGTTTACATCATTAGCTGGAACGACCATTTCTTCATCCTCAAAGTCGAAGCCNATTCTTACTGCATCATCGACACTTTGGGGGAGAGGCTTTATGAAGGATGCAATCAGGCATATATCTTGAAATTTGACAGCAACACAGTGATATACAAAATGCCAGACGTCACTCAACCGTCGGACGAAAATGCAACCGGCGGTGACCAGCAAACAGTTGCAGATGTGTTAGAGCAGAATGACAGGCAGATCCAGCAAATCAATGGCAACAACGAGGTGGATTCTGTTGCGACAGAGACAGAAGAACAATTGAAANGCGAGCAGGAAGAAGAGGAGGTGGTTGTGTGCAGAGGGAAAGAAGCATGCAAAGAGTACATCAAAAGCTTCTTGGCAGCAATCCCCATTAGAGAATTGCAAGCAGATGTCAAGAAAGGCTTAATATCATCGACCCCACTTCACCACAGGCTACAAATTGAGTTTCACTATACTCAGTTGTTGCAGTCTTACAATGTTGTTCCGGTGGCCGAAGCAGCATCCATGACTTCTCCAGAGACTGTCTTGCAGTAACTGAGATTGTGTCACATNAATAATCTTTCTGCCAAATTAAGGAAAGTGTGGTTACTCTCTAACTAGTCTTACTATGCAAGAGTGTTTTTCTGATTTGAAGTGAAATTAACAAAAGGGAGGCTCATATGAGCTTTTTTTATGCTAAATGAGGAGTGACAGAATGAGCTGAGAGGTTGTGTCTGCATAGTTTGGCGATCTTCTTGTGTTTTGCCAAATCTATCAAGGGAAGTGTATCCTGTAAATGTATCTGTAATTTTTCTTTTCATGTGAGCTCAAACTTTTGGTTCCTA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00729	103386	107061	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000729s00041395.1	PF10358.4	NT-C2	17	138	5.20E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.630
SRR1783600	control	13.741
SRR1783602	moderate drought stress	13.677
SRR1811619	moderate drought stress	13.441

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	22.788
DRR006520	Root Summer glycyrrhizin high producing strain	23.073
DRR006521	Root Winter glycyrrhizin high producing strain	14.260
DRR006522	Root Winter glycyrrhizin high producing strain	13.848
DRR006523	Root Summer glycyrrhizin low producing strain	29.408
DRR006524	Root Summer glycyrrhizin low producing strain	29.582
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.863
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.809

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	66.746
SRR2868004	Drought Stress (root)	101.816
SRR2967015	Control (root)	74.947

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	123.658
SRR9715740	Leaf	93.292
SRR9715741	Leaf	150.135
SRR9715739	Root	21.010
SRR9715742	Root	76.408
SRR9715743	Root	64.418

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	17.785
SRR8749028	MeJA induced 9h	28.070
SRR8749029	MeJA induced 9h	15.822
SRR8749030	Uninduced	18.889
SRR8749031	Uninduced	13.168
SRR8749032	Uninduced	11.189

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	58.111
SRR8400027	Control - Root	55.856