Gene detail information of Glyur000727s00025958 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55470.2 | 4.00E-10 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| NR | NP_001235151.1 | 1.23E-19 | uncharacterized protein LOC100500493 [Glycine max] |
| Swissprot | tr|Q0JBH9|ERG3_ORYSJ | 3.00E-09 | Elicitor-responsive protein 3 |
| trEMBL | tr|C6T1X1|C6T1X1_SOYBN | 5.00E-20 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G41520.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00727 | 124118 | 125026 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000727s00025958.1 | PF00168.25 | C2 | 7 | 44 | 8.30E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.834 |
| SRR1783600 | control | 9.834 |
| SRR1783602 | moderate drought stress | 8.875 |
| SRR1811619 | moderate drought stress | 9.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.787 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.310 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.630 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.468 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 69.890 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 66.248 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.182 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.056 |
| SRR2868004 | Drought Stress (root) | 9.152 |
| SRR2967015 | Control (root) | 6.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.659 |
| SRR9715740 | Leaf | 2.758 |
| SRR9715741 | Leaf | 3.637 |
| SRR9715739 | Root | 3.141 |
| SRR9715742 | Root | 1.721 |
| SRR9715743 | Root | 0.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.027 |
| SRR8749028 | MeJA induced 9h | 25.286 |
| SRR8749029 | MeJA induced 9h | 25.664 |
| SRR8749030 | Uninduced | 28.455 |
| SRR8749031 | Uninduced | 30.488 |
| SRR8749032 | Uninduced | 31.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.043 |
| SRR8400027 | Control - Root | 6.928 |