Gene detail information of Glyur000727s00025944 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49000.1 | 4.00E-05 | |
| NR | XP_003616383.1 | 4.25E-51 | hypothetical protein MTR_5g079600 [Medicago truncatula] |
| trEMBL | tr|G7KBN8|G7KBN8_MEDTR | 2.00E-51 | Uncharacterized protein {ECO:0000313|EMBL:AFK47487.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00727 | 42853 | 43293 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.862 |
| SRR1783600 | control | 6.937 |
| SRR1783602 | moderate drought stress | 7.535 |
| SRR1811619 | moderate drought stress | 8.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.373 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.454 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.125 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.021 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.901 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.034 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 38.127 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 37.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.916 |
| SRR2868004 | Drought Stress (root) | 9.887 |
| SRR2967015 | Control (root) | 10.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 35.330 |
| SRR9715740 | Leaf | 71.994 |
| SRR9715741 | Leaf | 53.752 |
| SRR9715739 | Root | 11.694 |
| SRR9715742 | Root | 17.902 |
| SRR9715743 | Root | 15.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.754 |
| SRR8749028 | MeJA induced 9h | 26.118 |
| SRR8749029 | MeJA induced 9h | 23.870 |
| SRR8749030 | Uninduced | 24.783 |
| SRR8749031 | Uninduced | 12.791 |
| SRR8749032 | Uninduced | 12.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.973 |
| SRR8400027 | Control - Root | 13.595 |