Gene detail information of Glyur000727s00025942 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006596618.1 | 7.74E-15 | PREDICTED: rRNA 2'-O-methyltransferase fibrillarin-like [Glycine max] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00727 | 33010 | 33309 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.838 |
| SRR1783600 | control | 13.106 |
| SRR1783602 | moderate drought stress | 12.955 |
| SRR1811619 | moderate drought stress | 11.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.882 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.803 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.089 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.295 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.719 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.578 |
| SRR2868004 | Drought Stress (root) | 2.885 |
| SRR2967015 | Control (root) | 4.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.384 |
| SRR9715740 | Leaf | 0.882 |
| SRR9715741 | Leaf | 0.747 |
| SRR9715739 | Root | 6.791 |
| SRR9715742 | Root | 5.474 |
| SRR9715743 | Root | 3.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.412 |
| SRR8400027 | Control - Root | 12.578 |