Gene detail

Gene detail information of Glyur000726s00027898.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G66340.1	0	Signal transduction histidine kinase, hybrid-type, ethylene sensor
NR	XP_004515180.1	0	PREDICTED: ethylene receptor-like isoform X2 [Cicer arietinum]
COG	YP_007109317.1	1.00E-63	multi-sensor hybrid histidine kinase [Geitlerinema sp. PCC 7407]
Swissprot	tr\|O81122\|ETR1_MALDO	0	Ethylene receptor
trEMBL	tr\|I1LVH5\|I1LVH5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G37050.1}

Sequence

Transcript Sequence

>Glyur000726s00027898.1
TTCCGTCTATTCATTTTCATTTATTCTCCTCTCTGTTCCCCTCTGCTTTCTGCTCTTGCTCTTCCATAATCATCTATCCATTTTTCATTTCCATTTTGCGAAAAAGGGAGAATTGGCTGAGGTGGTTCAATCAATATGGAGTCCTGCAATTGTATTGAGCCGCAATGGCCAGCTGATGATTTATTGATGAAATACCAATATATCTCAGATTTCTTCATTGCCCTTGCTTATTTCTCAATCCCTCTTGAGCTTATATACTTTGTTAAGAAATCAGCAGTATTTCCATATAGATGGGTCCTTGTTCAGTTTGGCGCTTTCATAGTTCTATGTGGAGCAACACATCTAATTAATTTATGGACCTTTACAATTCATTCAAGAACTGTGGCAATTGTAATGACCACTGCTAAGGTTTTAACTGCTGTGGTATCATGTGCCACTGCCCTTATGCTTGTACATATTATTCCTGATTTATTAAGTGTTAAAACTCGGGAATTATTTTTAAAGAACAAGGCTGCAGAGCTTGATAGAGAAATGGGCCTGATTCGCACACAGGAAGAAACTGGTCGTCATGTTAGGATGTTGACTCATGAGATTAGAAGCACTCTTGACAGACACACAATACTGAAAACGACTCTTGTTGAATTGGGCAGAACTTTGGCACTGGAGGAATGTGCCTTATGGATGCCAACACGTACTGGGTTGGAGCTTCAACTATCTTACACACTGCGACAGCAGAATCCAGTTGGATATACAGTACCCATTCACCTTCCTGTGATCAANGAAGTATTTAGTAGCAACCGTGCAGTAAAAATTTCATCAAATTGCCCGGTTGCTAGGTTACGACCTCATGCTGCAAAATACATGCCTGGGGCAGTAGTAGCTATTCGGGTTCCTCTCTTACATCTTTCTAATTTCCAAATATATGATTGGCCTGAGGTTTCAACAAGAAACTATGCTTTGATGGTTTTGATGCTTCCATCTGACAGTGCCAGGCAATGGCATGTACATGAGTTAGAGCTGGTAGAAGTAGTTGCTGATCAGGTAGCTGTTGCTCTTTCACATGCTGCAATCTTAGAAGAGTCAATGAGGGCAAGGGATCAGCTCATGGAGCAGAATGTTGCACTTGATCTAGCAAGAAGAGAAGCAGAAACTGCAATTCGTGCACGCAATGACTTTTTGGCTGTTATGAATCATGAGATGAGAACTCCCATGCATGCTATTATTGCACTCTCTTCATTGTTACAGGAAACAGATCTGACTGCTGAGCAACGCCTGATGGTGGAGACAATATTGAAAAGCAGCAATTTATTGGCTACTCTAATCAACGATGTTTTGGATCTTTCACGGCTTGAAGATGGCAGTCTTCAACTTGAAACAGCAACATTTAACCTTCATTCATTGTTCAGAGAGGTCTTTAACTTGATTAGGCCTGTTGCATCTGTTAGAAAGTTGTCACTTACTTTACATTTAGCATCAGATTTGCCAATGTATGCCATTGGTGATGAAAAACGTCTCGTGCAAACTCTTCTGAATGTTTTTGGTAATGCTGTGAAGTTTTCAAAAGAGGGTGGCATTTCCATCACCGCTTTTGTTGCAAAGCCTGAATCCTTCAGGGATACTAGATTTCCTGACTTTCTACCTGTACCAAGTGATAGCCACTTTTATTTGCGAGTACAGGTAAAAGATTCAGGTATAGGAATCAATCCACAAGATATCCCAAAGTTATTCACTAAGTTTGTTAATCTCATGGAAGGGCATATTTGGATTGAAAGCGAAGGTATTGGTAAAGGATGTACAGTCACTTTTATAGTAAAACTTGGAATTGCAGACCGGTCAAATGAATTTAAACTACCTTTCATACCTAAAGCTCCAGTAAATCATGGATCTACAAACTTTGCCGGGCTCAAAGTTCTTGTCATGGATGATAATGGGGTTAGCAGGANAGCAACAAAGGGACTTCTTATGCATTTAGGATGTGATGTCACAGCTGTAAGCTCAAGTGAGGAATGCCTGCGTGTCNTTTCTCTGGAACACAAAGTGGTCTTCATGGACGTTTGTACCGGGTTAGATGGTTACGAAGTAGCGGTACGCATACAAGAGAAGTTCACAAAACGTCAAGATCATAGACCACTAATAGTTGCTCTTACTGGAAATACCAACAAGTTGACAAAAGAGAAGTGTATGAGGGTTGGTATGGATGGCCTTATATTGAAACCTGTTTCTGTTGACAAAATGAGGGCTGTTTTATCTGAACTCTTGGAGCGTCGAGTTCTGTTTGAAACCATTTAAAACCACCAGGAATGGCTTCTTATTTTCTGTTGTACATAGCAAAACCAAATTCGAAGAGATGCAAATTTATGAAGCAATGAGGCAACTGACATGAATTTGTCATCCTTATGAGATCTGGGCAAAAGGAATAGTGACNGAGTCTGGATTGTTAAATCCATTTTTGTGAACAGAAGTTCATTTATGTTTATATATTATTATGCATTTTTATATCATTTCAGGCTTTTGATGTTTTGCAGTGGTGGTGAAATTTCATTTACATTGTCCCAGATTGTTTTAGTAAGTTTTAATTGTTTTAGGTAAGACCATGAGGTGCTTCACGAGATAAAAACTCTCTCTAGACTTGACAAATTTAGGTTACTACTCTAGTACAATATGTGGAAATACGGATCCGGATTCCCTGCAGTCGGGGGAATTCCACATTCATAGAGTCGGATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00726	112579	119853	-

Gene family

Gene family	subfamily
Transcription Factors Family	Orphans

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14509	ETR, ERS	EC:2.7.13.-	MAPK signaling pathway - plant	map04016
			Plant hormone signal transduction	map04075

Gene Ontology

biological_process

GO:0000160 phosphorelay signal transduction system

GO:0007165 signal transduction

cellular_component
GO:0016020 membrane

molecular_function

GO:0000155 phosphorelay sensor kinase activity

GO:0004871 signal transducer activity

GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000726s00027898.1	PF01590.21	GAF	158	307	4.20E-14
Glyur000726s00027898.1	PF00512.20	HisKA	344	408	2.60E-17
Glyur000726s00027898.1	PF02518.21	HATPase_c	455	560	1.10E-12
Glyur000726s00027898.1	PF00072.19	Response_reg	592	703	3.00E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.751
SRR1783600	control	6.739
SRR1783602	moderate drought stress	6.347
SRR1811619	moderate drought stress	6.517

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.018
DRR006520	Root Summer glycyrrhizin high producing strain	9.036
DRR006521	Root Winter glycyrrhizin high producing strain	13.274
DRR006522	Root Winter glycyrrhizin high producing strain	13.179
DRR006523	Root Summer glycyrrhizin low producing strain	10.656
DRR006524	Root Summer glycyrrhizin low producing strain	10.565
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.832
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.986

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.050
SRR2868004	Drought Stress (root)	20.202
SRR2967015	Control (root)	15.015

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.273
SRR9715740	Leaf	8.931
SRR9715741	Leaf	9.482
SRR9715739	Root	2.462
SRR9715742	Root	8.012
SRR9715743	Root	6.286

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	17.666
SRR8749028	MeJA induced 9h	10.922
SRR8749029	MeJA induced 9h	7.815
SRR8749030	Uninduced	9.501
SRR8749031	Uninduced	8.202
SRR8749032	Uninduced	4.909

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.672
SRR8400027	Control - Root	17.244