Gene detail information of Glyur000726s00027894 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22170.1 | 6.00E-43 | Lipase/lipooxygenase, PLAT/LH2 family protein |
| NR | KEH29404.1 | 4.17E-75 | PLAT-plant-stress protein [Medicago truncatula] |
| trEMBL | tr|A0A072UI52|A0A072UI52_MEDTR | 2.00E-75 | PLAT-plant-stress protein {ECO:0000313|EMBL:KEH29404.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00726 | 82365 | 83164 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000726s00027894.1 | PF01477.18 | PLAT | 31 | 150 | 3.40E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.726 |
| SRR1783600 | control | 0.887 |
| SRR1783602 | moderate drought stress | 1.436 |
| SRR1811619 | moderate drought stress | 1.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.201 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.199 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.827 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.017 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.199 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.295 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.342 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.011 |
| SRR2868004 | Drought Stress (root) | 3.278 |
| SRR2967015 | Control (root) | 2.703 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.801 |
| SRR9715740 | Leaf | 0.115 |
| SRR9715741 | Leaf | 1.522 |
| SRR9715739 | Root | 0.276 |
| SRR9715742 | Root | 1.026 |
| SRR9715743 | Root | 1.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.927 |
| SRR8749028 | MeJA induced 9h | 0.631 |
| SRR8749029 | MeJA induced 9h | 1.484 |
| SRR8749030 | Uninduced | 0.530 |
| SRR8749031 | Uninduced | 0.208 |
| SRR8749032 | Uninduced | 0.677 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.010 |
| SRR8400027 | Control - Root | 1.063 |