Gene detail information of Glyur000726s00027891 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001240906.1 | 8.92E-154 | uncharacterized protein LOC100778880 [Glycine max] |
| COG | YP_007059806.1 | 9.00E-13 | tRNA-guanine transglycosylase [Synechococcus sp. PCC 6312] |
| trEMBL | tr|C6T7F2|C6T7F2_SOYBN | 3.00E-154 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G10281.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00726 | 63368 | 67960 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000726s00027891.1 | PF01702.13 | TGT | 100 | 247 | 2.10E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.471 |
| SRR1783600 | control | 4.468 |
| SRR1783602 | moderate drought stress | 4.799 |
| SRR1811619 | moderate drought stress | 4.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.382 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.447 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.124 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.679 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.496 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.312 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.205 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.147 |
| SRR2868004 | Drought Stress (root) | 7.564 |
| SRR2967015 | Control (root) | 6.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.223 |
| SRR9715740 | Leaf | 5.165 |
| SRR9715741 | Leaf | 3.320 |
| SRR9715739 | Root | 1.344 |
| SRR9715742 | Root | 6.324 |
| SRR9715743 | Root | 4.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.793 |
| SRR8749028 | MeJA induced 9h | 6.883 |
| SRR8749029 | MeJA induced 9h | 8.181 |
| SRR8749030 | Uninduced | 1.437 |
| SRR8749031 | Uninduced | 0.989 |
| SRR8749032 | Uninduced | 0.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.412 |
| SRR8400027 | Control - Root | 7.760 |